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Comparative analysis of the Mercenaria mercenaria genome provides insights into the diversity of transposable elements and immune molecules in bivalve mollusks

Sarah Farhat , Eric Bonnivard , Emmanuelle Pales Espinosa , Arnaud Tanguy , Isabelle Boutet et al.
BMC Genomics, 2022, 23 (1), pp.192. ⟨10.1186/s12864-021-08262-1⟩
Journal articles hal-03619539v1

DNA Library of Life

Guillaume Lecointre , Line Le Gall , Frédéric Delsuc , Stephane Hourdez , Jean-Yves Rasplus et al.
European Journal of Taxonomy, 266-275; 282-291, pp.ISSN 2118-9773 ISBN 978-285653-805-0, 2017
Special issue hal-04050110v1

Structural Study of the Cobetia marina Bacteriophage 1 (Carin-1) by Cryo-EM

Alessio d'Acapito , Thomas Roret , Eleftherios Zarkadas , Pierre-Yves Mocaër , Florian Lelchat et al.
Journal of Virology, 2023, pp.e0024823. ⟨10.1128/jvi.00248-23⟩
Journal articles hal-04047089v1
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Temperature Affects the Biological Control of Dinoflagellates by the Generalist Parasitoid Parvilucifera rostrata

Matthew Schmitt , Aaron Telusma , Estelle Bigeard , Laure Guillou , Catharina Alves-De-Souza et al.
Microorganisms, 2022, 10 (2), pp.385. ⟨10.3390/microorganisms10020385⟩
Journal articles hal-03603190v1
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A large-scale comparison of reproduction and recruitment of the stalked barnacle Pollicipes pollicipes across Europe

Alba Aguión , Teresa Cruz , José Luis Acuña , Caroline Broudin , João Castro et al.
Marine Biology, 2022, 169 (5), pp.63. ⟨10.1007/s00227-022-04050-x⟩
Journal articles hal-03971382v1
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Phytoplanktonic response to simulated volcanic and desert dust deposition events in the South Indian and Southern Oceans

Carla Geisen , Céline Ridame , Emilie Journet , Pierre Delmelle , Dominique Marie et al.
Limnology and Oceanography, 2022, 67 (7), pp.1537-1553. ⟨10.1002/lno.12100⟩
Journal articles hal-03726468v1
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A robust approach to estimate relative phytoplankton cell abundances from metagenomes

Juan José Pierella Karlusich , Eric Pelletier , Lucie Zinger , Fabien Lombard , Adriana Zingone et al.
Molecular Ecology Resources, 2022, ⟨10.1111/1755-0998.13592⟩
Journal articles hal-03559541v1
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The diversification of the antimicrobial peptides from marine worms is driven by environmental conditions

Renato Bruno , Céline Boidin-Wichlacz , Oleg Melnyk , Daniela Zeppilli , Céline Landon et al.
Science of the Total Environment, In press, pp.162875. ⟨10.1016/j.scitotenv.2023.162875⟩
Journal articles hal-04034266v1
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Investigating the risk of non-indigenous species introduction through ship hulls in Chile

Javier Pinochet , Antonio Brante , Claire Daguin-Thiébaut , Florence Tellier , Frédérique Viard et al.
Management of Biological Invasions, 2023, 14 (1), pp.156-177. ⟨10.3391/mbi.2023.14.1.09⟩
Journal articles hal-04026853v1

Observing the biology of the ocean through an integrated genomic and imaging approach

L Guidi , F. Not , J.O. Irisson , F. Lombard
Mongoos Workshop, 2020, Online, Unknown Region
Conference papers hal-04024052v1

From plankton functional traits to marine ecosystem functions: Assessing functional diversity of plankton communities from high throughput -omics data and its impact on oceanic biogeochemical cycles

Sakina-Dorothée Ayata , E. Faure , A.-S. Benoiston , F. Not , Olivier Aumont et al.
Functional Ecology Conference, 2018, Nancy, France
Conference papers hal-04024046v1

A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5

R. Kiko , M. Picheral , David Antoine , Marcel Babin , Léo Berline et al.
Aquatic Sciences Meeting, 2021, Online, Unknown Region
Conference papers hal-04024038v1

Assessing functional diversity of plankton communities from high throughput –omics data

S.-D. Ayata , E. Faure , A.-S. Benoiston , O. Silva , V. Sonnet et al.
Colloque de Bilan et de Prospective du programme LEFE, Mar 2018, Clermon-Ferrand, France. 2018
Conference poster hal-04021818v1

Temperature and Salinity Changes in Coastal Waters of Western Europe: Variability, Trends and Extreme Events

Guillaume Charria , Peggy Rimmelin-Maury , Eric Goberville , Stéphane L’Helguen , Nicolas Barrier et al.
Evolution of Marine Coastal Ecosystems under the Pressure of Global Changes, Springer International Publishing, pp.207-226, 2020, 978-3-030-43483-0. ⟨10.1007/978-3-030-43484-7_15⟩
Book sections hal-04003325v1

Evolution des adaptations respiratoires des Polynoidae des sources hydrothermales profondes

Victor Le Layec
Sciences du Vivant [q-bio]. Sorbonne Université (France), 2021. Français. ⟨NNT : ⟩
Theses tel-04000137v1
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Culturing Diatoms

Daniel Vaulot , Gust Bilcke , Peter Chaerle , Angela Falciatore , Priscillia Gourvil et al.
Johannes Goessling; Johann Lavaud; João Serôdio. Diatom Photosynthesis: From Primary Production to High Value Molecules, Wiley-Scrivener, In press
Book sections hal-04000031v1

Hemoglobins are a keystone adaptation for deep-sea hydrothermal vent scaleworms

Victor Le Layec , Stephane Hourdez
16th Deep-sea biology symposium, Sep 2021, Brest, France
Conference poster hal-03994175v1
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Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of marine parasites

Iris Rizos , Pavla Debeljak , Thomas Finet , Dylan Klein , Sakina-Dorothée Ayata et al.
Preprints, Working Papers, ... hal-03993694v1
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Stomach content and stable isotope analyses provide complementary insights into the trophic ecology of coastal temperate bentho-demersal assemblages under environmental and anthropogenic pressures

Sturbois Anthony , A Cozic , Gauthier Schaal , Nicolas Desroy , Pascal Riera et al.
Marine Environmental Research, 2022, 182, pp.105770. ⟨10.1016/j.marenvres.2022.105770⟩
Journal articles hal-03830764v1

Response of rhodolith (maerl) beds to global and local changes

Zujaila Qui-Minet
Life Sciences [q-bio]. Sorbonne Université UPMC, 2018. English. ⟨NNT : ⟩
Theses tel-03981576v1
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A dataset on trophic modes of aquatic protists

Lisa Schneider , Konstantinos Anestis , Joost Mansour , Anna Anschütz , Nathalie Gypens et al.
Biodiversity Data Journal, 2020, 8, ⟨10.3897/bdj.8.e56648⟩
Journal articles hal-03971058v1
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Specific niche requirements underpin multidecadal range edge stability, but may introduce barriers for climate change adaptation

Louise Firth , Daniel Harris , Julie Blaze , Martin Marzloff , Aurélien Boyé et al.
Diversity and Distributions, 2021, 27 (4), pp.668-683. ⟨10.1111/ddi.13224⟩
Journal articles hal-03971088v1
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Modeling water regulation ecosystem services: A review in the context of ecosystem accounting

Stoyan Nedkov , Sylvie Campagne , Bilyana Borisova , Petr Krpec , Hristina Prodanova et al.
Ecosystem Services, 2022, 56, pp.101458. ⟨10.1016/j.ecoser.2022.101458⟩
Journal articles hal-03971122v1
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Engaging at the science-policy interface as an early-career researcher: experiences and perceptions in biodiversity and ecosystem services research

Anna Filyushkina , Hyeonju Ryu , Andrew Kadykalo , Ranjini Murali , C. Sylvie Campagne et al.
Ecosystems and People, 2022, 18 (1), pp.397-409. ⟨10.1080/26395916.2022.2085807⟩
Journal articles hal-03971131v1
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Intra‐genomic rRNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing

Miguel Sandin , Sarah Romac , Fabrice Not
Environmental Microbiology, 2022, 24 (7), pp.2979-2993. ⟨10.1111/1462-2920.16081⟩
Journal articles hal-03971165v1
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PlanktoScope: Affordable Modular Quantitative Imaging Platform for Citizen Oceanography

Thibaut Pollina , Adam Larson , Fabien Lombard , Hongquan Li , David Le Guen et al.
Frontiers in Marine Science, 2022, 9, ⟨10.3389/fmars.2022.949428⟩
Journal articles hal-03971225v1
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Global Phylogeography of Marine Synechococcus in Coastal Areas Reveals Strong Community Shifts

Hugo Doré , Jade Leconte , Ulysse Guyet , Solène Breton , Gregory Farrant et al.
mSystems, 2022, 7 (6), ⟨10.1128/msystems.00656-22⟩
Journal articles hal-03971550v2
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Carbon and nitrogen uptake through photosynthesis and feeding by photosymbiotic Acantharia

Joost Samir Mansour , Per Juel Hansen , Cédrix Leroux , Fabrice Not
Open Research Europe, 2022, 2, pp.120. ⟨10.12688/openreseurope.14983.1⟩
Journal articles hal-03971595v1
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EukProt: A database of genome-scale predicted proteins across the diversity of eukaryotes

Daniel Richter , Cédric Berney , Jürgen Strassert , Yu-Ping Poh , Emily Herman et al.
Peer Community Journal, 2022, 2, pp.e56. ⟨10.24072/pcjournal.173⟩
Journal articles hal-03971621v2
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Presence of the tunicate Asterocarpa humilis on ship hulls and aquaculture facilities in the coast of the Biobío Region, south central Chile

Javier Pinochet , Jean-Charles Leclerc , Antonio Brante , Claire Daguin-Thiébaut , Christian Díaz et al.
PeerJ, 2017, 5, pp.e3672. ⟨10.7717/peerj.3672⟩
Journal articles hal-03971627v1