Microfluidic device for quantifying bacterial chemotaxis in controlled and stationary chemical gradients
Abstract
Chemotaxis refers to the ability of organisms to detect chemical gradients and bias their motion accordingly.
Quantifying this bias is critical for many applications and this requires a device that can generate and maintain a
constant concentration field over a long period allowing for the observation of bacterial responses. In 2010,
Ahmed et al. introduced a method that combines microfluidics and hydrogel to facilitate the diffusion of
chemical species and to set a linear gradient in a bacterial suspension in the absence of liquid flow. The device
consists of three closely parallel channels: the two outermost channels contain chemical species at varying
concentrations, forming a uniform, stationary and controlled gradient between them. Bacteria positioned in the
central channel respond to this gradient by accumulating towards the high chemoattractant concentrations.
Video-imaging and analysis give access to the key motility and chemotactic parameters of the studied bacterial
species. This technique offers a significant advantage over other microfluidic techniques as it enables
observations in a stationary gradient. Here, we outline a modified and improved protocol that allows for the
renewal of the bacterial population, modification of the chemical environment, and the performance of new
measurements using the same chip. To demonstrate its efficacy, the protocol was used to measure the response of a strain of Escherichia coli to gradients of α-methyl-aspartate across the entire response range of the bacteria and for different gradients.
Origin | Files produced by the author(s) |
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