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Rescoring ensembles of protein-protein docking poses using consensus approaches

Guillaume Launay , Masahito Ohue , Julia Prieto Santero , Yuri Matsuzaki , Cécile Hilpert et al.
Preprints, Working Papers, ... hal-02873713v1
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In-vitro and in-vivo antileishmanial activity of inexpensive Amphotericin B formulations: Heated Amphotericin B and Amphotericin B-loaded microemulsion

Andreza Rochelle , Vale Morais , André Leandro Silva , Andreza Rochelle Do Vale Morais , André Leandro Silva et al.
Experimental Parasitology, 2018, 192, pp.85-92. ⟨10.1016/j.exppara.2018.07.017⟩
Journal articles hal-02370461v1
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A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants

Roberto B.M. Marano , Telma Fernandes , Célia Manaia , Olga C Nunes , Donald Morrison et al.
Environment International, 2020, 144, pp.106035. ⟨10.1016/j.envint.2020.106035⟩
Journal articles hal-02931405v1
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Relating switching rates between normal and persister cells to substrate and antibiotic concentrations: a mathematical modelling approach supported by experiments

G. Carvalho , C. Guilhen , D. Balestrino , C. Forestier , Jean-Denis Mathias et al.
Microbial Biotechnology, 2017, 10 (6), pp.1616-1627. ⟨10.1111/1751-7915.12739⟩
Journal articles hal-01779031v1
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Combined effects of drought and the fungicide tebuconazole on aquatic leaf litter decomposition

S. Pesce , O. Zoghlami , C. Margoum , J. Artigas , Arnaud Chaumot et al.
Aquatic Toxicology, 2016, 173, pp.120-131. ⟨10.1016/j.aquatox.2016.01.012⟩
Journal articles hal-01804836v1
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Structural and functional responses of leaf-associated fungal communities to chemical pollution in streams

Florent Rossi , Joan Artigas , Clarisse Mallet
Freshwater Biology, 2017, 62 (7), pp.1207-1219. ⟨10.1111/fwb.12937⟩
Journal articles hal-01808289v1
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A Pediococcus strain to rescue honeybees by decreasing Nosema ceranae-and pesticide-induced adverse effects

Elodie Peghaire , Anne Moné , Frédéric Delbac , Didier Debroas , Frédérique Chaucheyras-Durand et al.
Pesticide Biochemistry and Physiology, In press, 163, pp.138-146. ⟨10.1016/j.pestbp.2019.11.006⟩
Journal articles hal-02359078v1
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Role of Biofilms in Contaminant Bioaccumulation and Trophic Transfer in Aquatic Ecosystems: Current State of Knowledge and Future Challenges

Chloé Bonnineau , Joan Artigas , Betty Chaumet , Aymeric Dabrin , Juliette J. Fabure et al.
Reviews of Environmental Contamination and Toxicology (Continuation of Residue Reviews), Springer, pp.115 - 153, 2020, 978-3-030-52540-8. ⟨10.1007/398_2019_39⟩
Book sections hal-02734075v1
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La méthode PICT (Pollution-Induced Community Tolerance), un outil complémentaire pour l’évaluation du risque et le biomonitoring des pesticides ?

Annette Bérard , Joan Artigas , C Leboulanger , Soizic Morin , Christian Mougin et al.
Other publications hal-03402786v1
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Lyme Snap: a feasibility study of on-line declarations of erythema migrans in a rural area of France

P. Letertre-Gibert , Gwenaël Vourc’h , Isabelle Lebert , Magalie René-Martellet , V. Corbin-Valdenaire et al.
Ticks and Tick-borne Diseases, 2020, 11, ⟨10.1016/j.ttbdis.2019.101301⟩
Journal articles hal-02503295v1
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Phytoplankton community responses to temperature fluctuations under different nutrient concentrations and stoichiometry

Miriam Gerhard , Apostolos‐manuel Koussoroplis , Helmut Hillebrand , Maren Striebel
Ecology, 2019, 100 (11), ⟨10.1002/ecy.2834⟩
Journal articles hal-03969147v1
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Feeding in the frequency domain: coarser‐grained environments increase consumer sensitivity to resource variability, covariance and phase

Apostolos‐manuel Koussoroplis , Svenja Schälicke , Michael Raatz , Moritz Bach , Alexander Wacker et al.
Ecology Letters, 2019, 22 (7), pp.1104-1114. ⟨10.1111/ele.13267⟩
Journal articles hal-03969117v1
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Top‐Down Controls of Bacterial Metabolism: A Case Study from a Temperate Freshwater Lake Ecosystem

Angia Sriram Pradeep Ram , Marie-Eve Mauduit , Jonathan Colombet , Fanny Perriere , Antoine Thouvenot et al.
Microorganisms, 2022, 7 (2), pp.715. ⟨10.3390/microorganisms10040715⟩
Journal articles hal-03865107v1
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Using Principal Component Analysis to Assess Water Quality from the Landing Stages in Coastal Region

Antoine Tamsa Arfao , Mamert Fils Onana , Ernest Koji , Luciane Marlyse Moungang , Olive Vivien Noah Ewoti et al.
American Journal of Water Resources, 2021, 9 (1), pp.23-31. ⟨10.12691/ajwr-9-1-4⟩
Journal articles hal-03454652v1
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Morphology, morphometry and infraciliature of four new species of Clevelandellida de Puytorac and Grain, 1976 (Ciliophora: Armophorea) from the digestive tube of hydromorphic earthworms in the Cameroonian coastal zone

Paul Alain Nana , Nectaire Lié , Nyamsi Tchatcho , Fils Mamert Onana , Zéphyrin Fokam et al.
Protistology, 2022, 16 (3), pp.187-198. ⟨10.21685/1680-0826-2022-16-3-4⟩
Journal articles hal-03833613v1
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Effects of Copper Sulfate and Zinc Sulfate on Cell Adhesion of Staphylococcus aureus and Aeromonas hydrophila Stemming from Different Cell Growth Phases in Aquatic Microcosm

Romeo Tagne Fodouop , Brice Hermann , Fokouong Tcholong , Antoine Tamsa Arfao , Ahmadou Fadimatou et al.
Acta Scientific Microbiology, 2021, 4 (8), pp.84-94. ⟨10.31080/ASMI.2021.04.0896⟩
Journal articles hal-03454639v1
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Distinct Spatial Patterns of SAR11, SAR86, and Actinobacteria Diversity along a Transect in the Ultra-oligotrophic South Pacific Ocean

Nyree J. West , Cécile Lepère , Carmem-Lara de O. Manes , Philippe Catala , David J. Scanlan et al.
Frontiers in Microbiology, 2016, 7, pp.234. ⟨10.3389/fmicb.2016.00234⟩
Journal articles hal-01294340v1
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FreshOmics : A manually curated and standardized –omics database for investigating freshwater microbiomes

Corinne Biderre-Petit , Jean‐christophe Charvy , Gisèle Bronner , Marina Chauvet , Didier Debroas et al.
Molecular Ecology Resources, 2022, ⟨10.1111/1755-0998.13692⟩
Journal articles hal-03768857v1
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Glyphosate-degrading behavior of five bacterial strains isolated from stream biofilms

Florent Rossi , Louis Carles , Florence Donnadieu , Isabelle Batisson , Joan Artigas et al.
Journal of Hazardous Materials, 2021, 420, pp.126651. ⟨10.1016/j.jhazmat.2021.126651⟩
Journal articles hal-03406037v1
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Distribution of dehalococcoidia in the anaerobic deep water of a remote meromictic crater lake and detection of dehalococcoidia-derived reductive dehalogenase homologous genes

Corinne Biderre-Petit , Eric Dugat-Bony , Mickaël Mege , Nicolas Parisot , Lorenz Adrian et al.
PLoS ONE, 2016, 11 (1), ⟨10.1371/journal.pone.0145558⟩
Journal articles hal-01599389v2
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Transcriptional profiling of Klebsiella pneumoniae defines signatures for planktonic, sessile and biofilm-dispersed cells

Cyril Guilhen , Nicolas Charbonnel , Nicolas Parisot , Nathalie Gueguen , Agnès Iltis et al.
BMC Genomics, 2016, 17 (1), ⟨10.1186/s12864-016-2557-x⟩
Journal articles hal-01394069v1
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Potential of preventive bioremediation to reduce environmental contamination by pesticides in an agricultural context: A case study with the herbicide 2,4-D

Louis Carles , Fabrice Martin-Laurent , Marion Devers , Aymé Spor , Nadine Rouard et al.
Journal of Hazardous Materials, 2021, 416, pp.125740. ⟨10.1016/j.jhazmat.2021.125740⟩
Journal articles hal-03237156v1
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Minimum inhibition and bacterial concentrations of the plant Moringa Oleifera extracts against the bacteria Escherichia coli and Staphylococcus aureux

Claire Stéphane Metsopkeng , Mireille Ebiane Nougang , Antoine Tamsa Arfao , Fanny Perrière , Luciane Marlyse Moungang et al.
Bacterial Empire, In press, ⟨10.36547/be.484⟩
Journal articles hal-03865237v1
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Effects of sulfonamide antibiotics on aquatic microbial community composition and functions

Martin Paumelle , Florence Donnadieu , Muriel Joly , Pascale Pascale Besse, P. Besse-Hoggan Besse-Hoggan , Joan Artigas et al.
Environment International, 2021, 146, pp.106198. ⟨10.1016/j.envint.2020.106198⟩
Journal articles hal-03037638v1
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Impacts des produits phytopharmaceutiques sur la biodiversité et les services écosystémiques. Synthèse de l’expertise scientifique collective

Sophie Leenhardt , Laure Mamy , Stéphane Pesce , Wilfried Sanchez , Anne Laure Achard et al.
INRAE; IFREMER Institut Francais de Recherche pour l'Exploitation de la Mer. 2022, 136 p
Reports hal-03759553v1
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Simulated drought regimes reveal community resilience and hydrological thresholds for altered decomposition

Hector Rodriguez Perez , Guillaume Borrel , Céline Leroy , Jean-Francois Carrias , Bruno Corbara et al.
Oecologia, 2018, 187 (1), pp.267-279. ⟨10.1007/s00442-018-4123-5⟩
Journal articles hal-01806866v1
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Temperature: Diet Interactions Affect Survival through Foraging Behavior in a Bromeliad-Dwelling Predator

Olivier Dézerald , Régis Céréghino , Bruno Corbara , Alain Dejean , Céline Leroy et al.
Biotropica, 2015, 47 (5), pp.569-578. ⟨10.1111/btp.12249⟩
Journal articles hal-02084254v1
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Photosynthetic microorganisms effectively contribute to bryophyte CO2 fixation in boreal and tropical regions

Vincent E J Jassey , Samuel Hamard , Cécile Lepère , Régis Céréghino , Bruno Corbara et al.
ISME Communications, 2022, 2, pp.64. ⟨10.1038/s43705-022-00149-w⟩
Journal articles hal-03792858v1
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Urbanization impacts the taxonomic and functional structure of aquatic macroinvertebrate communities in a small Neotropical city

Stanislas Talaga , Olivier Dézerald , Alexis Carteron , Céline Leroy , Jean-François Carrias et al.
Urban Ecosystems, 2017, 20 (5), pp.1001-1009. ⟨10.1007/s11252-017-0653-6⟩
Journal articles hal-02163968v1
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Functional trait responses of aquatic macroinvertebrates to simulated drought in a Neotropical bromeliad ecosystem

Olivier Dezerald , Régis Céréghino , Bruno Corbara , Alain Dejean , Céline Leroy et al.
Freshwater Biology, 2015, 60 (9), pp.1917-1929. ⟨10.1111/fwb.12621⟩
Journal articles hal-02184259v1