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Diatom phytochromes integrate the entire visible light spectra for photosensing in marine environments

Carole Duchêne , Jean-Pierre Bouly , Juan José Pierella Karlusich , Julien Sellés , Benjamin Bailleul et al.
2023
Preprints, Working Papers, ... hal-04016944v1
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Telomerase-independent survival leads to a mosaic of complex subtelomere rearrangements in $Chlamydomonas\ reinhardtii$

Frédéric Chaux , Nicolas Agier , Clotilde Garrido , Gilles Fischer , Stephan Walter Eberhard et al.
2023
Preprints, Working Papers, ... hal-03978722v1

PlantACT! – how to tackle the climate crisis

Heribert Hirt , Salim Al-Babili , Marilia Almeida-Trapp , Martin Antoine , Manuel Aranda et al.
Trends in Plant Science, 2023, ⟨10.1016/j.tplants.2023.01.005⟩
Journal articles hal-04037738v1
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Rubredoxin 1 promotes the proper folding of D1 and is not required for heme b559 assembly in Chlamydomonas photosystem II

Robert H Calderon , Catherine de Vitry , Francis-André Wollman , Krishna K Niyogi
Journal of Biological Chemistry, 2023, pp.102968. ⟨10.1016/j.jbc.2023.102968⟩
Journal articles hal-03995033v1
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The multiple routes of photosynthetic electron transfer in Chlamydomonas reinhardtii

Dany Croteau , Jean Alric , Benjamin Bailleul
Francis-André Wollman; Arthur Grossman. The Chlamydomonas Sourcebook - third edition, 2, Elsevier, pp.591-613, 2023, Organellar and Metabolic Processes, ⟨10.1016/B978-0-12-821430-5.00001-8⟩
Book sections hal-04006729v1
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Molecular chaperones, proteases, and unfolded protein responses

Michael Schroda , Catherine Devitry
Academic Press. The Chlamydomonas Sourcebook: Introduction to Chlamydomonas and Its Laboratory Use (Grossman, A. R. and Wollman, F.-A., eds.), Organellar and Metabolic Processes, vol. 2. Elsevier, Amsterdam, 3rd edition., 2, Elsevier, In press, 9780128214305
Book sections hal-03995015v1
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Rubisco and inorganic carbon assimilation

Katia Wostrikoff , Luke C M Mackinder
Arthur Grossman; Francis-André Wollman. The Chlamydomonas Sourcebook, 3rd edition., Volume 2 Organellar and Metabolics Processes, Elsevier; Academic Press, In press, 978-0-12-821430-5
Book sections hal-04003943v1
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Culturing Diatoms

Daniel Vaulot , Gust Bilcke , Peter Chaerle , Angela Falciatore , Priscillia Gourvil et al.
Johannes Goessling; Johann Lavaud; João Serôdio. Diatom Photosynthesis: From Primary Production to High Value Molecules, Wiley-Scrivener, In press
Book sections hal-04000031v1

Alignment-based protein mutational landscape prediction: doing more with less

Marina Abakarova , Céline Marquet , Michael Rera , Burkhard Rost , Elodie Laine et al.
2022
Preprints, Working Papers, ... hal-03903639v1
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory

Rory J Craig , Sean D Gallaher , Shengqiang Shu , Patrice Salomé , Jerry W Jenkins et al.
2022
Preprints, Working Papers, ... hal-03876006v1
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OHP2 is not required for psbA translation in Chlamydomonas

Fei Wang , Korbinian Dischinger , Lisa Désirée Westrich , Irene Meindl , Felix Egidi et al.
2022
Preprints, Working Papers, ... hal-03876026v1
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Extraction and selection of high-molecular-weight DNA for long-read sequencing from Chlamydomonas reinhardtii

Frédéric Chaux-Jukic , Nicolas Agier , Stephan Eberhard , Zhou Xu
2022
Preprints, Working Papers, ... hal-03850623v1
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Converting antimicrobial into targeting peptides reveals key features governing protein import into mitochondria and chloroplasts

Oliver D Caspari , Clotilde Garrido , Yves Choquet , Francis-André Wollman , Ingrid Lafontaine et al.
2022
Preprints, Working Papers, ... hal-03844827v1
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High efficient cyclic electron flow and functional supercomplexes in Chlamydomonas cells

Pierre Joliot , Julien Sellés , Françis-André Wollman , André Verméglio
Biochimica biophysica acta (BBA) - Bioenergetics, 2022, 1863 (8), pp.148909. ⟨10.1016/j.bbabio.2022.148909⟩
Journal articles hal-03979801v1
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Absorption changes in Photosystem II in the Soret band region upon the formation of the chlorophyll cation radical [P$_{D1}$ P$_{D2}$]$^+$

Alain Boussac , Miwa Sugiura , Makoto Nakamura , A. William Rutherford , Stefania Viola et al.
2022
Preprints, Working Papers, ... hal-03795578v1
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The Assembly of Photosynthetic Proteins

Yves Choquet , Francis-André Wollman
Academic Press. The Chlamydomonas SourceBook, 3rd Edition, Volume 2 Organellar and Metabolics Processes, Arthur Grossman and Francis-André Wollman Editors, Volume 2 Organellar and Metabolics Processes, Arthur Grossman and Francis-André Wollman Editors, Elsevier, In press, 9780128214305
Book sections hal-03941663v1
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Light-driven processes: key players of the functional biodiversity in microalgae

Angela Falciatore , Benjamin Bailleul , Alix Boulouis , Jean-Pierre Bouly , Sandrine Bujaldon et al.
Comptes Rendus. Biologies, 2022, 345 (2), pp.1-24. ⟨10.5802/crbiol.80⟩
Journal articles hal-03800267v1

Proteomics unveil a central role for peroxisomes in butyrate assimilation of the heterotrophic Chlorophyte alga Polytomella sp

Julien Lacroux , A. Atteia , S. Brugière , Y. Couté , Olivier Vallon et al.
2022
Preprints, Working Papers, ... hal-03768848v1
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Rhythms and Clocks in Marine Organisms

N Sören Häfker , Gabriele Andreatta , Alessandro Manzotti , Angela Falciatore , Florian Raible et al.
Annual Review of Marine Science, pp.509-538, 2022, ⟨10.1146/annurev-marine-030422-113038⟩
Book sections hal-03944242v1

Light sensing in the Ocean: studying diatom phytochrome photoreceptors

Carole Duchêne
Life Sciences [q-bio]. Sorbonne Université, 2022. English. ⟨NNT : ⟩
Theses tel-04013110v1

Detection and Quantification of Small Noncoding RNAs in Marine Diatoms

Alessandra Rogato , Angela Falciatore
Marine Genomics, 2498, Springer US, pp.315-326, 2022, Methods in Molecular Biology, ⟨10.1007/978-1-0716-2313-8_17⟩
Book sections hal-03850476v1
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Detection and Quantification of Small Noncoding RNAs in Marine Diatoms

Alessandra Rogato , Angela Falciatore
Marine Genomics, 2498, Springer US, pp.315-326, 2022, Methods in Molecular Biology, ⟨10.1007/978-1-0716-2313-8_17⟩
Book sections hal-03870492v1
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Probing the proton release by Photosystem II in the S1 to S2 high-spin transition

Alain Boussac , Miwa Sugiura , Julien Sellés
Biochimica biophysica acta (BBA) - Bioenergetics, 2022, 1863 (5), pp.148546. ⟨10.1016/j.bbabio.2022.148546⟩
Journal articles hal-03795529v1
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Sensing and Signalling in Diatom Responses to Abiotic Cues

Marianne Jaubert , Carole Duchêne , Peter Kroth , Alessandra Rogato , Jean-Pierre Bouly et al.
Angela Falciatore; Thomas Mock. The Molecular Life of Diatoms, Springer International Publishing; Springer International Publishing, pp.607-639, 2022, 978-3-030-92498-0. ⟨10.1007/978-3-030-92499-7_21⟩
Book sections hal-03979119v1
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Photosynthetic Light Reactions in Diatoms. II. The Dynamic Regulation of the Various Light Reactions

Bernard Lepetit , Douglas Campbell , Johann Lavaud , Claudia Büchel , Reimund Goss et al.
The Molecular Life of Diatoms, Springer International Publishing, pp.423-464, 2022, ⟨10.1007/978-3-030-92499-7_16⟩
Book sections hal-03672201v1
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Transit Peptides Often Require Downstream Unstructured Sequence for Efficient Chloroplast Import in Chlamydomonas reinhardtii

Oliver D Caspari
Frontiers in Plant Science, 2022, 13, ⟨10.3389/fpls.2022.825797⟩
Journal articles hal-03798895v1
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Photosynthetic Light Reactions in Diatoms. I. The Lipids and Light-Harvesting Complexes of the Thylakoid Membrane

Claudia Büchel , Reimund Goss , Benjamin Bailleul , Douglas Campbell , Johann Lavaud et al.
The Molecular Life of Diatoms, Springer International Publishing, pp.397-422, 2022, ⟨10.1007/978-3-030-92499-7_15⟩
Book sections hal-03672196v1

Response to light stimuli in the marine diatom Phaeodactylum tricornutum : Involvement of bHLH-PAS proteins

Alessandro Manzotti
Life Sciences [q-bio]. Sorbonne Université, 2022. English. ⟨NNT : ⟩
Theses tel-04013001v1
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Multiple Profile Models Extract Features from Protein Sequence Data and Resolve Functional Diversity of Very Different Protein Families

Vasco Giovagnetti , Marianne Jaubert , Mahendra Shukla , Petra Ungerer , Jean-Pierre Bouly et al.
Molecular Biology and Evolution, 2022, 39 (4), pp.509-525. ⟨10.1093/molbev/msac070⟩
Journal articles hal-03850483v1
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Multiple Profile Models Extract Features from Protein Sequence Data and Resolve Functional Diversity of Very Different Protein Families

R. Vicedomini , J.P. Bouly , E. Laine , A. Falciatore , A. Carbone et al.
Molecular Biology and Evolution, 2022, 39 (4), ⟨10.1093/molbev/msac070⟩
Journal articles hal-03850479v1