Impact of the Substitution Pattern at the Basic Center and Geometry of the Amine Fragment on 5-HT6 and D3R Affinity in the 1H-pyrrolo[3,2-c]quinoline Series - CNRS - Centre national de la recherche scientifique Accéder directement au contenu
Article Dans Une Revue Molecules Année : 2023

Impact of the Substitution Pattern at the Basic Center and Geometry of the Amine Fragment on 5-HT6 and D3R Affinity in the 1H-pyrrolo[3,2-c]quinoline Series

Katarzyna Grychowska
  • Fonction : Auteur
Wojciech Pietruś
Ludmiła Kulawik
  • Fonction : Auteur
Grzegorz Satała
  • Fonction : Auteur
Andrzej J Bojarski
Joanna Gołębiowska
Agnieszka Nikiforuk
Philippe Marin
Rafał Kurczab
Paweł Zajdel

Résumé

Salt bridge (SB, double-charge-assisted hydrogen bonds) formation is one of the strongest molecular non-covalent interactions in biological systems, including ligand-receptor complexes. In the case of G-protein-coupled receptors, such an interaction is formed by the conserved aspartic acid (D3.32) residue and the basic moiety of the aminergic ligand. This study aims to determine the influence of the substitution pattern at the basic nitrogen atom and the geometry of the amine moiety at position 4 of 1H-pyrrolo[3,2-c]quinoline on the quality of the salt bridge formed in the 5-HT 6 receptor and D 3 receptor. To reach this goal, we synthetized and biologically evaluated a new series of 1H-pyrrolo[3,2-c]quinoline derivatives modified with various amines. The selected compounds displayed a significantly higher 5-HT 6 R affinity and more potent 5-HT 6 R antagonist properties when compared with the previously identified compound PZ-1643, a dual-acting 5-HT 6 R/D 3 R antagonist; nevertheless, the proposed modifications did not improve the activity at D 3 R. As demonstrated by the in silico experiments, including molecular dynamics simulations, the applied structural modifications were highly beneficial for the formation and quality of the SB formation at the 5-HT 6 R binding site; however, they are unfavorable for such interactions at D 3 R.

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hal-03956220 , version 1 (25-01-2023)

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Katarzyna Grychowska, Wojciech Pietruś, Ludmiła Kulawik, Ophélie Bento, Grzegorz Satała, et al.. Impact of the Substitution Pattern at the Basic Center and Geometry of the Amine Fragment on 5-HT6 and D3R Affinity in the 1H-pyrrolo[3,2-c]quinoline Series. Molecules, 2023, 28, pp.1096. ⟨10.3390/molecules28031096⟩. ⟨hal-03956220⟩
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