How to design an efficient and robust pipeline for 16S rRNA-gene sequence analysis to improve our understanding on microbial communities?
Lucas Auer
,
Laurent Cauquil
,
Stephane Chaillou
,
Céline Delbes
,
Eric Dugat-Bony
et al.
JOBIM 16. Journées Ouvertes Biologie Informatique Mathématiques , Jul 2015, Clermont-Ferrand, France.
, 2015
Conference poster
hal-01195512v1
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Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage
Flavia Aburjaile
,
Marine Rohmer
,
Hugues Parrinello
,
Marie-Bernadette Maillard
,
Eric Beaucher
et al.
19. International Conference on Bacilli & Gram-Positive Bacteria , Jun 2017, Berlin, Germany.
, 2017
Conference poster
hal-01535200v1
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Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of [i]Propionibacterium freudenreichii[/i]
Valentin Loux
,
Mahendra Mariadassou
,
Sintia Almeida da Silva
,
Helene Chiapello
,
Amal Hammami
et al.
JOBIM 16.Journées Ouvertes de Biologie, Informatique et Mathématiques , Jul 2015, Clermont-Ferrand, France.
, 2015
Conference poster
hal-01209851v1
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Composition of β-lactoglobulin/lactoferrin heteroprotein coacervates
Paulo Peres de Sa Peixoto Junior
,
Guilherme Miranda-Tavares
,
Aurélie Nicolas
,
Claire Roiland
,
Pascaline Hamon
et al.
13. International Hydrocolloids Conference (IHC) , May 2016, Guelph, Canada
Conference papers
hal-01330036v1
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Staphylococcus aureus induces DNA damage in host cell
Nadia Berkova
,
Nassim Mouhali
,
Aurélie Nicolas
,
Martine Deplanche
,
Minh-Thu Nguyen
et al.
Journées d’Animation Scientifique du Département Santé Animale , Oct 2022, Anglet, France.
, 2022
Conference poster
hal-03859134v1
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Letter to the Editor: About bovine beta-casofensin genetic variants-A comment on Bruno et al. (2017) Response
Pascale Plaisancié
,
J. Bruno
,
Aurélie Nicolas
,
Sandra Pesenti
,
J. Schwarz
et al.
Journal articles
hal-02003829v1
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Corrigendum: Heterogeneous Family of Cyclomodulins: Smart Weapons That Allow Bacteria to Hijack the Eukaryotic Cell Cycle and Promote Infections
Rachid El-Aouar Filho
,
Aurélie Nicolas
,
Thiago Luiz de Paula Castro
,
Vasco Ariston de Carvalho Azevedo
,
Pierre L. Goossens
et al.
Journal articles
hal-01594586v1
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Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage
Flavia Aburjaile
,
Marine Rohmer
,
Hugues Parrinello
,
Marie-Bernadette Maillard
,
Eric Beaucher
et al.
Journal articles
hal-01416005v1
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Corrigendum to “Variants of β-casofensin, a bioactive milk peptide, differently modulate the intestinal barrier: In vivo and ex vivo studies in rats” (J. Dairy Sci. 100:3360–3372)
J. Bruno
,
Aurélie Nicolas
,
S. Pesenti
,
J. Schwarz
,
J. Simon
et al.
Journal articles
hal-02122840v1
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Key role of caspase-1 in bacterial clearance during S. aureus infection of osteoblasts-like cells.
Elma Lima Leite
,
Arthur Gautron
,
Aurélie Nicolas
,
Jordane Ossemond
,
Fillipe L R Do Carmo
et al.
SFM Microbes 2021 , Sep 2021, Nantes, France.
, 2021
Conference poster
hal-03356389v1
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Dystrophin's central domain forms a complex filament that becomes disorganized by in-frame deletions
Olivier Delalande
,
Anne-Elisabeth Molza
,
Raphael dos Santos Morais
,
Angélique Chéron
,
Emeline Pollet
et al.
Journal articles
hal-01795395v2
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Inflammasomes involvement in Staphylococcus aureus infection of human osteoblast-like cells MG-63
Elma Lima Leite
,
Arthur Gautron
,
Martine Deplanche
,
Aurélie Nicolas
,
David Gilot
et al.
14.congrès national de la Société Française de Microbiologie (SFM) , Oct 2018, Paris, France.
, 2018
Conference poster
hal-01888292v1
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Structure and Dynamics of Heteroprotein Coacervates
P.D.S. Peixoto
,
G.M. Tavares
,
Thomas Croguennec
,
Aurélie Nicolas
,
P. Hamon
et al.
Journal articles
hal-01367243v1
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Transcriptome Architecture of Osteoblastic Cells Infected With Staphylococcus aureus Reveals Strong Inflammatory Responses and Signatures of Metabolic and Epigenetic Dysregulation
Aurélie Nicolas
,
Martine Deplanche
,
Pierre-Henri Commere
,
Alan Diot
,
Clemence Genthon
et al.
Journal articles
hal-03650997v1
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HasSium : a bioinformatic tool for fast reliable sorting and classification of very large samples of pyrosequenced amplicons.
Aurélie Nicolas
,
Stéphane Avner
,
Alexis Dufresne
,
Stéphane Mahé
,
Eric Petit
et al.
JOBIM 2009 , Jun 2009, Nantes, France
Conference papers
hal-00452319v1
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Inflammasome activation and an involvement of Caspase-1 in a bacterial clearance during S. aureus infection.
Elma Lima Leite
,
Aurélie Nicolas
,
Arthur Gautron
,
Martine Deplanche
,
Jordane Ossemond
et al.
Bactinflan , Lia Bactinflam, INRAE STLO, Jun 2022, Webinar, France
Conference papers
hal-03690660v1
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Computational study of the human dystrophin repeats: interaction properties and molecular dynamics.
Baptiste Legrand
,
Emmanuel Giudice
,
Aurélie Nicolas
,
Olivier Delalande
,
Elisabeth Le Rumeur
et al.
Journal articles
inserm-00689190v1
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Etude in silico de dystrophines tronquées dans les myopathies de Duchenne et de Becker
Aurélie Nicolas
Bio-Informatique, Biologie Systémique [q-bio.QM]. Universite Rennes 1, 2012. Français.
⟨NNT : ⟩
Theses
tel-01343326v1
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Cholesterol favors the anchorage of human dystrophin repeats 16 to 21 in membrane at physiological surface pressure.
Sarah Ameziane-Le Hir
,
Céline Raguénès-Nicol
,
Gilles Paboeuf
,
Aurélie Nicolas
,
Elisabeth Le Rumeur
et al.
Journal articles
hal-00965782v1
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Assessment of the structural and functional impact of in-frame mutations of the DMD gene, using the tools included in the eDystrophin online database.
Aurélie Nicolas
,
Céline Lucchetti-Miganeh
,
Rabah Ben Yaou
,
Jean-Claude Kaplan
,
Jamel Chelly
et al.
Journal articles
inserm-00736304v1
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Extracellular vesicles produced by human and animal Staphylococcus aureus strains share a highly conserved core proteome
Natayme Rocha Tartaglia
,
Aurélie Nicolas
,
Vinicius de Rezende Rodovalho
,
Brenda Silva Rosa Da Luz
,
Valérie Briard-Bion
et al.
Journal articles
hal-02638124v1
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The genomic basis of the Streptococcus thermophilus health-promoting properties
Emeline Roux
,
Aurélie Nicolas
,
Florence Valence
,
Grégoire Siekaniec
,
Victoria Chuat
et al.
Journal articles
hal-03612308v1
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Becker muscular dystrophy severity is linked to the structure of dystrophin.
Aurélie Nicolas
,
Céline Raguénès-Nicol
,
Rabah Ben Yaou
,
Sarah Ameziane-Le Hir
,
Angélique Chéron
et al.
Journal articles
hal-01117005v1
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Letter to the Editor: A response to Chessa et al. (2018)
Pascale Plaisancié
,
J. Bruno
,
Aurélie Nicolas
,
S. Pesenti
,
J. Schwarz
et al.
Journal articles
hal-02122844v1
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Metatranscriptomics and metabolic modeling to identify bacterial metabolic interactions during the manufacture of a model pressed cheese.
Wenfan Cao
,
Maxime Lecomte
,
Solène Le Fur
,
Julie J. Aubert
,
Marie-Bernadette Maillard
et al.
FOODMICRO 2022 , Aug 2022, Athènes, Greece
Conference papers
hal-03781287v1
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Inflammasomes involvement in Staphylococcus aureus infection of human osteoblast-like cells MG-63
Elma Lima Leite
,
Arthur Gautron
,
Martine Deplanche
,
Aurélie Nicolas
,
David Gilot
et al.
JAS DSA 2018 Journées d'animation scientifique du département Santé Animale , Oct 2018, Chapelle sur Erdre, France
Conference papers
hal-01889269v1
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Clinical phenotypes as predictors of the outcome of skipping around DMD exon 45.
Andrew R Findlay
,
Nicolas Wein
,
Yuuki Kaminoh
,
Laura E Taylor
,
Diane M Dunn
et al.
Journal articles
hal-01117017v1
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Molecular clues about the dystrophin-neuronal nitric oxide synthase interaction: a theoretical approach.
Emmanuel Giudice
,
Anne-Elisabeth Molza
,
Yoann Laurin
,
Aurélie Nicolas
,
Elisabeth Le Rumeur
et al.
Journal articles
hal-00935150v1
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Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii
Valentin Loux
,
Mahendra Mariadassou
,
Sintia Almeida da Silva
,
Hélène Chiapello
,
Amal Hammami
et al.
20. Colloque du Club des Bactéries Lactiques , Jun 2015, Lille, France.
, 2015
Conference poster
hal-01170054v1
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Métatranscriptomique et modèle métabolique pour identifier la succession des métabolismes bactériens en interaction lors de la fabrication d’un fromage modèle à pâte pressée.
Wenfan Cao
,
Maxime Lecomte
,
Solène Le Fur
,
Julie J. Aubert
,
Marie-Bernadette Maillard
et al.
23ème édition du colloque du Club des Bactéries Lactiques , UMR INRAE - Institut Agro STLO (Science et Technologie du Lait et de l’Œuf), Jun 2022, Rennes, France
Conference papers
hal-03694338v1
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