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authFullName_s : Aurélie Nicolas

How to design an efficient and robust pipeline for 16S rRNA-gene sequence analysis to improve our understanding on microbial communities?

Lucas Auer , Laurent Cauquil , Stephane Chaillou , Céline Delbes , Eric Dugat-Bony et al.
JOBIM 16. Journées Ouvertes Biologie Informatique Mathématiques, Jul 2015, Clermont-Ferrand, France. , 2015
Conference poster hal-01195512v1

Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage

Flavia Aburjaile , Marine Rohmer , Hugues Parrinello , Marie-Bernadette Maillard , Eric Beaucher et al.
19. International Conference on Bacilli & Gram-Positive Bacteria, Jun 2017, Berlin, Germany. , 2017
Conference poster hal-01535200v1

Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of [i]Propionibacterium freudenreichii[/i]

Valentin Loux , Mahendra Mariadassou , Sintia Almeida da Silva , Helene Chiapello , Amal Hammami et al.
JOBIM 16.Journées Ouvertes de Biologie, Informatique et Mathématiques, Jul 2015, Clermont-Ferrand, France. , 2015
Conference poster hal-01209851v1

Composition of β-lactoglobulin/lactoferrin heteroprotein coacervates

Paulo Peres de Sa Peixoto Junior , Guilherme Miranda-Tavares , Aurélie Nicolas , Claire Roiland , Pascaline Hamon et al.
13. International Hydrocolloids Conference (IHC), May 2016, Guelph, Canada
Conference papers hal-01330036v1
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Staphylococcus aureus induces DNA damage in host cell

Nadia Berkova , Nassim Mouhali , Aurélie Nicolas , Martine Deplanche , Minh-Thu Nguyen et al.
Journées d’Animation Scientifique du Département Santé Animale, Oct 2022, Anglet, France. , 2022
Conference poster hal-03859134v1

Letter to the Editor: About bovine beta-casofensin genetic variants-A comment on Bruno et al. (2017) Response

Pascale Plaisancié , J. Bruno , Aurélie Nicolas , Sandra Pesenti , J. Schwarz et al.
Journal of Dairy Science, 2018, 101 (6), pp.4706-4706. ⟨10.3168/jds.2018-14426⟩
Journal articles hal-02003829v1
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Corrigendum: Heterogeneous Family of Cyclomodulins: Smart Weapons That Allow Bacteria to Hijack the Eukaryotic Cell Cycle and Promote Infections

Rachid El-Aouar Filho , Aurélie Nicolas , Thiago Luiz de Paula Castro , Vasco Ariston de Carvalho Azevedo , Pierre L. Goossens et al.
Frontiers in Cellular and Infection Microbiology, 2017, 7 (article 208), pp.364. ⟨10.3389/fcimb.2017.00208⟩
Journal articles hal-01594586v1
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Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage

Flavia Aburjaile , Marine Rohmer , Hugues Parrinello , Marie-Bernadette Maillard , Eric Beaucher et al.
BMC Genomics, 2016, 17 (1), open acess. ⟨10.1186/s12864-016-3367-x⟩
Journal articles hal-01416005v1
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Corrigendum to “Variants of β-casofensin, a bioactive milk peptide, differently modulate the intestinal barrier: In vivo and ex vivo studies in rats” (J. Dairy Sci. 100:3360–3372)

J. Bruno , Aurélie Nicolas , S. Pesenti , J. Schwarz , J. Simon et al.
Journal of Dairy Science, 2018, 101 (6), pp.5667. ⟨10.3168/jds.2018-101-6-5667⟩
Journal articles hal-02122840v1
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Key role of caspase-1 in bacterial clearance during S. aureus infection of osteoblasts-like cells.

Elma Lima Leite , Arthur Gautron , Aurélie Nicolas , Jordane Ossemond , Fillipe L R Do Carmo et al.
SFM Microbes 2021, Sep 2021, Nantes, France. , 2021
Conference poster hal-03356389v1
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Dystrophin's central domain forms a complex filament that becomes disorganized by in-frame deletions

Olivier Delalande , Anne-Elisabeth Molza , Raphael dos Santos Morais , Angélique Chéron , Emeline Pollet et al.
Journal of Biological Chemistry, 2018, 293 (18), pp.6637-6646. ⟨10.1074/jbc.M117.809798⟩
Journal articles hal-01795395v2
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Inflammasomes involvement in Staphylococcus aureus infection of human osteoblast-like cells MG-63

Elma Lima Leite , Arthur Gautron , Martine Deplanche , Aurélie Nicolas , David Gilot et al.
14.congrès national de la Société Française de Microbiologie (SFM), Oct 2018, Paris, France. , 2018
Conference poster hal-01888292v1

Structure and Dynamics of Heteroprotein Coacervates

P.D.S. Peixoto , G.M. Tavares , Thomas Croguennec , Aurélie Nicolas , P. Hamon et al.
Langmuir, 2016, 32 (31), pp.7821-7828. ⟨10.1021/acs.langmuir.6b01015⟩
Journal articles hal-01367243v1
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Transcriptome Architecture of Osteoblastic Cells Infected With Staphylococcus aureus Reveals Strong Inflammatory Responses and Signatures of Metabolic and Epigenetic Dysregulation

Aurélie Nicolas , Martine Deplanche , Pierre-Henri Commere , Alan Diot , Clemence Genthon et al.
Frontiers in Cellular and Infection Microbiology, 2022, 12, pp.854242. ⟨10.3389/fcimb.2022.854242⟩
Journal articles hal-03650997v1

HasSium : a bioinformatic tool for fast reliable sorting and classification of very large samples of pyrosequenced amplicons.

Aurélie Nicolas , Stéphane Avner , Alexis Dufresne , Stéphane Mahé , Eric Petit et al.
JOBIM 2009, Jun 2009, Nantes, France
Conference papers hal-00452319v1
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Inflammasome activation and an involvement of Caspase-1 in a bacterial clearance during S. aureus infection.

Elma Lima Leite , Aurélie Nicolas , Arthur Gautron , Martine Deplanche , Jordane Ossemond et al.
Bactinflan, Lia Bactinflam, INRAE STLO, Jun 2022, Webinar, France
Conference papers hal-03690660v1
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Computational study of the human dystrophin repeats: interaction properties and molecular dynamics.

Baptiste Legrand , Emmanuel Giudice , Aurélie Nicolas , Olivier Delalande , Elisabeth Le Rumeur et al.
PLoS ONE, 2011, 6 (8), pp.e23819. ⟨10.1371/journal.pone.0023819⟩
Journal articles inserm-00689190v1
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Etude in silico de dystrophines tronquées dans les myopathies de Duchenne et de Becker

Aurélie Nicolas
Bio-Informatique, Biologie Systémique [q-bio.QM]. Universite Rennes 1, 2012. Français. ⟨NNT : ⟩
Theses tel-01343326v1
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Cholesterol favors the anchorage of human dystrophin repeats 16 to 21 in membrane at physiological surface pressure.

Sarah Ameziane-Le Hir , Céline Raguénès-Nicol , Gilles Paboeuf , Aurélie Nicolas , Elisabeth Le Rumeur et al.
Biochimica et Biophysica Acta:Biomembranes, 2014, 1838 (5), pp.1266-73. ⟨10.1016/j.bbamem.2014.01.010⟩
Journal articles hal-00965782v1
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Assessment of the structural and functional impact of in-frame mutations of the DMD gene, using the tools included in the eDystrophin online database.

Aurélie Nicolas , Céline Lucchetti-Miganeh , Rabah Ben Yaou , Jean-Claude Kaplan , Jamel Chelly et al.
Orphanet Journal of Rare Diseases, 2012, 7 (1), pp.45. ⟨10.1186/1750-1172-7-45⟩
Journal articles inserm-00736304v1
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Extracellular vesicles produced by human and animal Staphylococcus aureus strains share a highly conserved core proteome

Natayme Rocha Tartaglia , Aurélie Nicolas , Vinicius de Rezende Rodovalho , Brenda Silva Rosa Da Luz , Valérie Briard-Bion et al.
Scientific Reports, 2020, 10 (1), pp.1-13. ⟨10.1038/s41598-020-64952-y⟩
Journal articles hal-02638124v1
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The genomic basis of the Streptococcus thermophilus health-promoting properties

Emeline Roux , Aurélie Nicolas , Florence Valence , Grégoire Siekaniec , Victoria Chuat et al.
BMC Genomics, 2022, 23, pp.1-23. ⟨10.1186/s12864-022-08459-y⟩
Journal articles hal-03612308v1
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Becker muscular dystrophy severity is linked to the structure of dystrophin.

Aurélie Nicolas , Céline Raguénès-Nicol , Rabah Ben Yaou , Sarah Ameziane-Le Hir , Angélique Chéron et al.
Human Molecular Genetics, 2015, 24 (5), pp.1267-79. ⟨10.1093/hmg/ddu537⟩
Journal articles hal-01117005v1

Letter to the Editor: A response to Chessa et al. (2018)

Pascale Plaisancié , J. Bruno , Aurélie Nicolas , S. Pesenti , J. Schwarz et al.
Journal of Dairy Science, 2018, 101 (6), pp.4706. ⟨10.3168/jds.2018-14426⟩
Journal articles hal-02122844v1
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Metatranscriptomics and metabolic modeling to identify bacterial metabolic interactions during the manufacture of a model pressed cheese.

Wenfan Cao , Maxime Lecomte , Solène Le Fur , Julie J. Aubert , Marie-Bernadette Maillard et al.
FOODMICRO 2022, Aug 2022, Athènes, Greece
Conference papers hal-03781287v1
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Inflammasomes involvement in Staphylococcus aureus infection of human osteoblast-like cells MG-63

Elma Lima Leite , Arthur Gautron , Martine Deplanche , Aurélie Nicolas , David Gilot et al.
JAS DSA 2018 Journées d'animation scientifique du département Santé Animale, Oct 2018, Chapelle sur Erdre, France
Conference papers hal-01889269v1

Clinical phenotypes as predictors of the outcome of skipping around DMD exon 45.

Andrew R Findlay , Nicolas Wein , Yuuki Kaminoh , Laura E Taylor , Diane M Dunn et al.
Annals of Neurology, 2015, 77 (4), pp.668-674. ⟨10.1002/ana.24365⟩
Journal articles hal-01117017v1

Molecular clues about the dystrophin-neuronal nitric oxide synthase interaction: a theoretical approach.

Emmanuel Giudice , Anne-Elisabeth Molza , Yoann Laurin , Aurélie Nicolas , Elisabeth Le Rumeur et al.
Biochemistry, 2013, 52 (44), pp.7777-84. ⟨10.1021/bi400794p⟩
Journal articles hal-00935150v1

Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii

Valentin Loux , Mahendra Mariadassou , Sintia Almeida da Silva , Hélène Chiapello , Amal Hammami et al.
20. Colloque du Club des Bactéries Lactiques, Jun 2015, Lille, France. , 2015
Conference poster hal-01170054v1
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Métatranscriptomique et modèle métabolique pour identifier la succession des métabolismes bactériens en interaction lors de la fabrication d’un fromage modèle à pâte pressée.

Wenfan Cao , Maxime Lecomte , Solène Le Fur , Julie J. Aubert , Marie-Bernadette Maillard et al.
23ème édition du colloque du Club des Bactéries Lactiques, UMR INRAE - Institut Agro STLO (Science et Technologie du Lait et de l’Œuf), Jun 2022, Rennes, France
Conference papers hal-03694338v1