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authFullName_s : Chris Bowler
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Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum

Xue Zhao , Achal Rastogi , Anne Flore Deton Cabanillas , Ouardia Ait Mohamed , Catherine Cantrel et al.
New Phytologist, 2020, 229, pp.3208 - 3220. ⟨10.1111/nph.17129⟩
Journal articles hal-03384417v1
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Clade-specific diversification dynamics of marine diatoms since the Jurassic

Eric Lewitus , Lucie Bittner , Shruti Malviya , Chris Bowler , Hélène Morlon et al.
Nature Ecology & Evolution, 2018, 2 (11), pp.1715-1723. ⟨10.1038/s41559-018-0691-3⟩
Journal articles hal-02408145v1
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Ecogenomics of key prokaryotes in the arctic ocean

Marta Royo-Llonch , Pablo Sánchez , Clara Ruiz-González , Guillem Salazar , Carlos Pedrós-Alió et al.
Preprints, Working Papers, ... hal-02946895v1

Modelling plankton ecosystems in the meta-omics era. Are we ready?

Krzysztof Franciszek Stec , Luigi Caputi , Pier Luigi Buttigieg , Domenico d'Alelio , Federico Matias Ibarbalz et al.
Marine Genomics, 2017, 32, pp.1-17. ⟨10.1016/j.margen.2017.02.006⟩
Journal articles hal-01584309v1

Central role for ferritin in the day/night regulation of iron homeostasis in marine phytoplankton.

Hugo Botebol , Emmanuel Lesuisse , Robert Šuták , Christophe Six , Jean-Claude Lozano et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (47), pp.14652-7. ⟨10.1073/pnas.1506074112⟩
Journal articles hal-01267693v1

The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium

J. Mark Cock , Lieven Sterck , Sophia Ahmed , Andrew E. Allen , Grigoris Amoutzias et al.
Advances in Botanical Research, 2012, 64, pp.141 - 184. ⟨10.1016/B978-0-12-391499-6.00005-0⟩
Journal articles hal-02649287v1
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Open science resources for the discovery and analysis of Tara Oceans data

Stéphane Pesant , Fabrice Not , Marc Picheral , Stefanie Kandels-Lewis , Noan Le Bescot et al.
Scientific Data , 2015, 2, pp.150023. ⟨10.1038/sdata.2015.23⟩
Journal articles hal-01253984v1
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Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export

Karine Leblanc , Bernard Queguiner , Frederic Diaz , Veronique Cornet , Mónica Michel-Rodriguez et al.
Nature Communications, 2018, 9 (1), pp.953. ⟨10.1038/s41467-018-03376-9⟩
Journal articles hal-02006275v1

Revealing and analyzing networks of marine microbial ecosystems

Damien Eveillard , Lionel Guidi , Lucie Bittner , Samuel Chaffron , Jeroen Raes et al.
Conférence Jacques Monod - Marine Ecosystems Biology, 2015, Roscoff, France
Conference papers hal-01176727v1

Environmental characteristics of Agulhas rings affect interocean plankton transport

Emilie Villar , Gregory Farrant , Michael Follows , Laurence Garczarek , Sabrina Speich et al.
Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩
Journal articles hal-01893637v1

Patterns and ecological drivers of ocean viral communities

Jennifer Brum , J Cesar Ignacio-Espinoza , Simon Roux , Guilhem Doulcier , Silvia G. Acinas et al.
Science, 2015, 348 ( 6237), pp.1261498. ⟨10.1126/science.1261498⟩
Journal articles hal-01768331v1
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Eukaryotic plankton diversity in the sunlit ocean

Noan Le Bescot , Ian Probert , Margaux Carmichael , Julie Poulain , Sarah Romac et al.
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Journal articles hal-01253979v1
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Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages

Magali Lescot , Pascal Hingamp , Kenji Kojima , Emilie Villar , Sarah Romac et al.
ISME Journal, 2016, 10 (5), pp.1134-1146. ⟨10.1038/ismej.2015.192⟩
Journal articles hal-02964380v1
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Environmental vulnerability of the global ocean epipelagic plankton community interactome

Samuel Chaffron , Erwan Delage , Marko Budinich , Damien Vintache , Nicolas Henry et al.
Science Advances , 2021, 7 (35), pp.eabg1921. ⟨10.1126/sciadv.abg1921⟩
Journal articles hal-03443359v2

Contribution of genome scale metabolic modeling to niche theory

Antoine Régimbeau , Marko Budinich , Abdelhalim Larhlimi , Juan Jose Pierella Karlusich , Olivier Aumont et al.
Preprints, Working Papers, ... hal-03352833v1
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An evolution towards scientific consensus for a sustainable ocean future

Françoise Gaill , Tanya Brodie Rudolph , Lara Lebleu , Denis Allemand , Robert Blasiak et al.
npj Ocean Sustainability, 2022, 1, pp.7. ⟨10.1038/s44183-022-00007-1⟩
Journal articles hal-03910001v1

An atypical member of the light-harvesting complex stress-related protein family modulates diatom responses to light.

Benjamin Bailleul , Alessandra Rogato , Alessandra de Martino , Sacha Coesel , Pierre Cardol et al.
Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (42), pp.18214-9. ⟨10.1073/pnas.1007703107⟩
Journal articles hal-00587670v1

A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the cell surface and facilitates uptake.

Joe Morrissey , Robert Sutak , Javier Paz-Yepes , Atsuko Tanaka , Ahmed Moustafa et al.
Current Biology - CB, 2015, 25 (3), pp.364-71. ⟨10.1016/j.cub.2014.12.004⟩
Journal articles hal-01132526v1
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PhytoCRISP-Ex: a web-based and stand-alone application to find specific target sequences for CRISPR/CAS editing

Achal Rastogi , Omer Murik , Chris Bowler , Leila Tirichine
BMC Bioinformatics, 2016, 17 (1), pp.261. ⟨10.1186/s12859-016-1143-1⟩
Journal articles inserm-02059918v1
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Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal

Shinya Sato , Deepak Nanjappa , Richard G Dorrell , Fabio Rocha Jimenez Vieira , Elena Kazamia et al.
Scientific Reports, 2020, 10 (1), pp.9449. ⟨10.1038/s41598-020-65941-x⟩
Journal articles inserm-02886223v1

Transcriptome profiling of sorted endoreduplicated nuclei from tomato fruits: how global shift in expression ascribed to dna ploidy influences rna-seq data normalization and interpretation

Julien Pirrello , Cynthia Deluche , Nathalie Frangne , Frederic Gevaudant , Elie Maza et al.
14. Solanaceae and 3. Cucurbitaceae Genomics Joint Conference - SOLCUC 2017, Sep 2017, Valencia, France
Conference papers hal-02734427v1
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Evolutionary analysis of DNA methyltransferases in microeukaryotes: Insights from the model diatom Phaeodactylum tricornutum

Leila Tirichine , Antoine Hoguin , Ouardia Ait Mohamed , Chris Bowler , Auguste Genovesio et al.
bioRxiv : n'est pas une revue mais un serveur de preprint, In press, ⟨10.1101/2021.06.11.447926⟩
Journal articles hal-03384427v1

Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum

Xue Zhao , Achal Rastogi , Anne Flore Deton Cabanillas , Ouardia Ait Mohamed , Catherine Cantrel et al.
New Phytologist, 2021, 229 (6), pp.3208-3220. ⟨10.1111/nph.17129⟩
Journal articles hal-03153441v1
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Ostreococcus tauri is a new model green alga for studying iron metabolism in eukaryotic phytoplankton

Gaëlle Lelandais , Ivo Scheiber , Javier Paz-Yepes , Jean-Claude Lozano , Hugo Botebol et al.
BMC Genomics, 2016, 17 (1), pp.319. ⟨10.1186/s12864-016-2666-6⟩
Journal articles hal-01313623v1

Blue Planet, Red and Green Photosynthesis

Juan José Pierella Karlusich , Charlotte Nef , Chris Bowler , Richard Dorrell
Books hal-03859161v1
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The $Phaeodactylum$ genome reveals the evolutionary history of diatom genomes

Chris Bowler , Andrew E. Allen , Jonathan H. Badger , Jane Grimwood , Kamel Jabbari et al.
Nature, 2008, 456 (7410), pp.239-244. ⟨10.1038/nature07410⟩
Journal articles cea-00910244v1
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Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae

Richard Dorrell , Alan Kuo , Zoltan Füssy , Elisabeth Richardson , Asaf Salamov et al.
Life Science Alliance, 2022, 6 (3), pp.e202201833. ⟨10.26508/lsa.202201833⟩
Journal articles hal-03859139v1
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Divergent and diversified proteome content across a serially acquired plastid lineage

Anna M G Novák Vanclová , Charlotte Nef , Adél Vancl , Fuhai Liu , Zoltán Füssy et al.
Preprints, Working Papers, ... hal-03913495v1

Characterization of two members of the cryptochrome/photolyase family from Ostreococcus tauri provides insights into the origin and evolution of cryptochromes

Marc Heijde , Gérald Zabulon , Florence Corellou , Tomoko Ishikawa , Johanna Brazard et al.
Plant, Cell and Environment, 2010, 33, pp.1614. ⟨10.1111/j.1365-3040.2010.02168.x⟩
Journal articles hal-00516094v1

Spectro-temporal characterization of the photoactivation mechanism of two new oxidized cryptochrome/photolyase photoreceptors

Johanna Brazard , Anwar Usman , Fabien Lacombat , Christian Ley , Monique M. Martin et al.
Journal of the American Chemical Society, 2010, 132 (13), pp.4935. ⟨10.1021/ja1002372⟩
Journal articles hal-00476826v1