Search - Archive ouverte HAL Access content directly

Filter your results

52 Results
authFullName_s : Eric Coissac

VULnerability of Populations under Extreme Scenarios (VULPES project)

Rachid Cheddadi , Alexandra-Jane Henrot , Louis François , Frédéric Boyer , Mark M. Bush et al.
American Geophysical Union, Fall Meeting 2018, AGU, Dec 2018, Washington, D. C., United States
Conference papers hal-02402094v1

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies

Pierre Taberlet , Sophie Prud’homme , Etienne Campione , Julien Roy , Christian Miquel et al.
Molecular Ecology, 2012, Environmental DNA, 21 (8), pp.1816-1820. ⟨10.1111/j.1365-294X.2011.05317.x⟩
Journal articles istex hal-01686266v1
Image document

Prey Preference of Snow Leopard (Panthera uncia) in South Gobi, Mongolia

Wasim Shehzad , Thomas Michael Mccarthy , Francois Pompanon , Lkhagvajav Purevjav , Eric Coissac et al.
PLoS ONE, 2012, 7 (2), pp.e32104. ⟨10.1371/journal.pone.0032104⟩
Journal articles insu-00845201v1
Image document

Assessment of the Food Habits of the Moroccan Dorcas Gazelle in M'Sabih Talaa, West Central Morocco, Using the trnL Approach

Moulay Abdeljalil Ait Baamrane , Wasim Shehzad , Ahmed Ouhammou , Abdelaziz Abbad , Mohamed Naimi et al.
PLoS ONE, 2012, 7 (4), pp.e35643. ⟨10.1371/journal.pone.0035643⟩
Journal articles insu-00845142v1

Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity

R. Frutos , Alain Viari , C. Ferraz , Anne Morgat , S. Eychenie et al.
Journal of Bacteriology, 2006, 188, pp.2533-2542. ⟨10.1128/JB.188.7.2533-2542.2006⟩
Journal articles hal-00113068v1
Image document

Whole mitochondrial genomes unveil the impact of domestication on goat matrilineal variability

Licia Colli , Hovirag Lancioni , Irene Cardinali , Anna Olivieri , Marco Rosario Capodiferro et al.
BMC Genomics, 2015, 16 (1), pp.1115. ⟨10.1186/s12864-015-2342-2⟩
Journal articles hal-01254132v1
Image document

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

Badr Benjelloun , Florian F. Alberto , Ian Streeter , Frédéric Boyer , Eric Coissac et al.
Frontiers in Genetics, 2015, 6, ⟨10.3389/fgene.2015.00107⟩
Journal articles hal-01964918v1
Image document

Investigating the genetics of Bti resistance using mRNA tag sequencing : application on laboratory strains and natural populations of the dengue vector Aedes aegypti

Margot Paris , Sébastien Marcombe , Eric Coissac , Vincent Corbel , Jean-Philippe David et al.
Evolutionary Applications, 2013, pp.n/a-n/a. ⟨10.1111/eva.12082⟩
Journal articles hal-01996754v1
Image document

Priority conservation areas for Cedrus atlantica in the Atlas Mountains, Morocco

Rachid Cheddadi , Pierre Taberlet , Frédéric Boyer , Eric Coissac , Ali Rhoujjati et al.
Conservation Science and Practice, 2022, 4 (6), pp.e12680. ⟨10.1111/csp2.12680⟩
Journal articles hal-03662298v1

Latent Dirichlet Allocation reveals spatial and taxonomic structure in a DNA‐based census of soil biodiversity from a tropical forest

Guilhem Sommeria‐klein , Lucie Zinger , Eric Coissac , Amaia Iribar , Heidy Schimann et al.
Molecular Ecology Resources, 2019, ⟨10.1111/1755-0998.13109⟩
Journal articles hal-02402988v1
Image document

La fluidité des génomes

Eric Coissac
Autre [q-bio.OT]. Université Pierre et Marie Curie - Paris VI, 2005
Habilitation à diriger des recherches tel-00011102v1

Comparative Genomics of Three Strains of Ehrlichia ruminantium: A Review.

R. Frutos , Alain Viari , C. Ferraz , Abdelkrim Bensaïd , Anne Morgat et al.
Annals of the New York Academy of Sciences, 2006, 1081, pp.417-433. ⟨10.1196/annals.1373.061⟩
Journal articles istex hal-00125031v1

Spatial modelling of plant diversity from high-throughput environmental dna sequence data

Angelika Studeny , Florence Forbes , Eric Coissac , Alain Viari , Celine Mercier et al.
45èmes Journées de Statistique, Société Française de Statistique, May 2013, Toulouse, France
Conference papers hal-00933699v1

Fifty thousand years of Arctic vegetation and megafaunal diet

Eske Willerslev , John Davison , Mari Moora , Martin Zobel , Eric Coissac et al.
Nature, 2014, 506 (7486), pp.47-51. ⟨10.1038/nature12921⟩
Journal articles hal-02640450v1
Image document

Environmental and biotic drivers of soil microbial β‐diversity across spatial and phylogenetic scales

Loïc Chalmandrier , Johan Pansu , Lucie Zinger , Frédéric Boyer , Eric Coissac et al.
Ecography, 2019, 42 (12), pp.2144 - 2156. ⟨10.1111/ecog.04492⟩
Journal articles hal-03032726v1
Image document

Microrefugia, Climate Change, and Conservation of Cedrus atlantica in the Rif Mountains, Morocco

Rachid Cheddadi , Alexandra-Jane Henrot , Louis François , Frédéric Boyer , Mark M. Bush et al.
Frontiers in Ecology and Evolution, 2017, 5, pp.114. ⟨10.3389/fevo.2017.00114⟩
Journal articles hal-01629785v1

Complete mitochondrial genome ofLutzomyia (Nyssomyia) umbratilis (Diptera: Psychodidae), the main vector of Leishmania guyanensis

Arthur Kocher , Jean-Charles Gantier , Hélène Holota , Céline Jeziorski , Eric Coissac et al.
Mitochondrial DNA Part A, 2016, 27 (6), pp.4219-4221. ⟨10.3109/19401736.2015.1022748⟩
Journal articles hal-01602798v1

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

A. Valentini , C. Miquel , M. A. Nawaz , E. Bellemain , Eric Coissac et al.
Molecular Ecology Resources, 2009, 9 (1), pp.51-60
Journal articles halsde-00378004v1

OBITools: a Unix-inspired software package for DNA metabarcoding

Frédéric Boyer , Céline Mercier , Aurélie Bonin , Yvan Le Bras , Pierre Taberlet et al.
Molecular Ecology Resources, 2015, pp.10.1111/1755-0998.12428. ⟨10.1111/1755-0998.12428⟩
Journal articles istex hal-01183582v1

Differential strain-specific diagnosis of the heartwater agent: Ehrlichia ruminantium

N. Vachiery , G. Maganga , T. Lefrancois , Y. Kandassamy , F. Stachurski et al.
Infection, Genetics and Evolution, 2008, 8 (4), pp.459-466. ⟨10.1016/j.meegid.2007.06.001⟩
Journal articles istex hal-00287922v1
Image document

The generality of cryptic dietary niche differences in diverse large-herbivore assemblages

Johan Pansu , Matthew C Hutchinson , T. Michael Anderson , Mariska Te Beest , Colleen M Begg et al.
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (35), ⟨10.1073/pnas.2204400119⟩
Journal articles hal-03818069v1

Mitochondrial Phylogenomics Resolves the Global Spread of Higher Termites, Ecosystem Engineers of the Tropics

Thomas Bourguignon , Nathan Lo , Jan Šobotnik , Simon Y. W. Ho , Naeem Iqbal et al.
Molecular Biology and Evolution, 2016, pp.msw253. ⟨10.1093/molbev/msw253⟩
Journal articles hal-03992186v1

Unraveling the biogeographical history of Chrysobalanaceae from plastid genomes

Léa Bardon , Cynthia Sothers , Ghillean Prance , Pierre-Jean Malé , Zhenxiang Xi et al.
American Journal of Botany, 2016, 103 (6), pp.1089-1102. ⟨10.3732/ajb.1500463⟩
Journal articles hal-03132947v1

Environmental DNA metabarcoding to investigate historic changes in biodiversity

Johan Pansu , Charline Giguet-Covex , Francesco Ficetola Gentile , Ludovic Gielly , Frederic Boyer et al.
6th. Congrès International « Barcode of Life », 2015, guelph, Canada. p. 264
Conference papers hal-01879611v1

ORTHOSKIM: In silico sequence capture from genomic and transcriptomic libraries for phylogenomic and barcoding applications

Charles Pouchon , Frédéric Boyer , Cristina Roquet , France Denoeud , Jérome Chave et al.
Molecular Ecology Resources, 2022, 22 (5), pp.2018-2037. ⟨10.1111/1755-0998.13584⟩
Journal articles hal-03839343v1

From museums to genomics: old herbarium specimens shed light on a C-3 to C-4 transition

Guillaume Besnard , Pascal-Antoine Christin , Pierre-Jean G. Malé , Emeline Lhuillier , Christine Lauzeral et al.
Journal of Experimental Botany, 2014, 65 (22), pp.6711-6721. ⟨10.1093/jxb/eru395⟩
Journal articles hal-02640074v1

Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family

Pierre-Jean G. Male , Lea Bardon , Guillaume Besnard , Eric Coissac , Frederic Delsuc et al.
Molecular Ecology Resources, 2014, 14 (5), pp.966 - 975. ⟨10.1111/1755-0998.12246⟩
Journal articles istex hal-01204217v1
Image document

The Treasure Vault Can be Opened: Large-Scale Genome Skimming Works Well Using Herbarium and Silica Gel Dried Material

Inger Greve Alsos , Sebastien Lavergne , Marie Kristine Føreid Merkel , Marti Boleda , Youri Lammers et al.
Plants, 2020, 9 (4), pp.432. ⟨10.3390/plants9040432⟩
Journal articles hal-02612289v1

Universal DNA-Based methods for Assessing the diet of grazing livestock and wildlife from feces

Anthony Pegard , Christian Miquel , Alice Valentini , Eric Coissac , Frédéric F. Bouvier et al.
Journal of Agricultural and Food Chemistry, 2009, 57 (13), pp.5700-5706. ⟨10.1021/jf803680c⟩
Journal articles hal-02666465v1

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

Lucie Zinger , Aurélie Bonin , Inger Alsos , Miklós Bálint , Holly Bik et al.
Molecular Ecology, 2019, 28 (8), pp.1857-1862. ⟨10.1111/mec.15060⟩
Journal articles hal-02375694v1