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Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae
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Alan Kuo
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Zoltan Füssy
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Elisabeth Richardson
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Asaf Salamov
et al.
Journal articles
hal-03859139v1
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Reference genome sequence of the model plant Setaria
Jeffrey Bennetzen
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Jeremy J. Schmutz
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Hao Wang
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Ryan Percifield
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Jennifer Hawkins
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hal-02114330v1
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Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2
S. Haridas
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R. Albert
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M. Binder
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J. Bloem
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Kurt Labutti
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hal-03508713v1
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Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi
Krisztina Krizsán
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Éva Almási
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Zsolt Merényi
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Neha Sahu
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Máté Virágh
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (15), pp.7409-7418. ⟨10.1073/pnas.1817822116⟩
Journal articles
hal-02587458v1
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Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)
Susan Brawley
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Nicolas Blouin
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Elizabeth Ficko-Blean
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Glen Wheeler
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Martin Lohr
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Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (31), pp.E6361-E6370. ⟨10.1073/pnas.1703088114⟩
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hal-02950557v1
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Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome
John L Bowman
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Takayuki Kohchi
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Katsuyuki T Yamato
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Jerry Jenkins
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Shengqiang Shu
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Journal articles
hal-03157918v1
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Comparative genomics reveals a dynamic genome evolution in the ectomycorrhizal milk‐cap ( Lactarius ) mushrooms
Annie Lebreton
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Nianwu Tang
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Alan Kuo
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Kurt Labutti
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William Andreopoulos
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Journal articles
hal-03946660v1
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Conserved white rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus
Shingo Miyauchi
,
Hayat Hage
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Elodie Drula
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Laurence Lesage-Meessen
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Jean-Guy Berrin
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Journal articles
hal-02868456v1
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Phylogenomics and Comparative Genomics Highlight Specific Genetic Features in Ganoderma Species
Yi-Fei Sun
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Annie Lebreton
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Jia-Hui Xing
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Yu-Xuan Fang
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Jing Si
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Journal articles
hal-03627194v1
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Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay
Hayat Hage
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Shingo Miyauchi
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Máté Virágh
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Elodie Drula
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Byoungnam Min
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Journal articles
hal-03226505v1
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
Ronald P. De Vries
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Robert Riley
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Ad Wiebenga
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Guillermo Aguilar-Osorio
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Sotiris Amillis
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Journal articles
hal-01496186v1
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Genetic determinants of endophytism in the Arabidopsis root mycobiome
Fantin Mesny
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Shingo Miyauchi
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Thorsten Thiergart
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Brigitte Pickel
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Lea Atanasova
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Journal articles
hal-03508738v1
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory
Rory J Craig
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Sean D Gallaher
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Shengqiang Shu
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Patrice Salomé
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Jerry W Jenkins
et al.
2022
Preprints, Working Papers, ...
hal-03876006v1
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Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri
Tammi C. Vesth
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Jane L. Nybo
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Sebastian Theobald
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Jens C. Frisvad
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Thomas O. Larsen
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Journal articles
hal-02094492v1
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Symbiotic nitrogen fixation in the reproductive structures of a basidiomycete fungus
Rachel Koch
,
Gyeong Mee Yoon
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Uma Aryal
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Kathleen Lail
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Mojgan Amirebrahimi
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Journal articles
hal-03353944v1
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Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi
Brian Looney
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Shingo Miyauchi
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Emmanuelle Morin
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Elodie Drula
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Pierre Emmanuel Courty
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Journal articles
hal-03606184v1
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Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12
Jill Gaskell
,
Phil Kersten
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Luis Larrondo
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Paulo Canessa
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Diego Martínez
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Journal articles
hal-01802856v1
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The genome of Eucalyptus grandis
Alexander Myburg
,
Dario Grattapaglia
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Gerald Tuskan
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Uffe Hellsten
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Richard Hayes
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Journal articles
hal-02285478v1
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A reference genome for common bean and genome-wide analysis of dual domestications
Jeremy Schmutz
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Phillip E. Mcclean
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Sujan Mamidi
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G. Albert Wu
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Steven B. Cannon
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Journal articles
hal-02638010v1
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory
Rory Craig
,
Sean Gallaher
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Shengqiang Shu
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Patrice Salomé
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Jerry Jenkins
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Journal articles
hal-03927369v1
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Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
Weihua Wu
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Ryan Davis
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Mary Bao Tran-Gyamfi
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Alan Kuo
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Kurt Labutti
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Journal articles
hal-01802800v1
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Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi
Dániel Knapp
,
Julianna Németh
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Kerrie Barry
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Matt Hainaut
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Bernard Henrissat
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Journal articles
hal-02094592v1
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
Abbot Oghenekaro
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Andriy Kovalchuk
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Tommaso Raffaello
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Susana Camarero
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Markus Gressler
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Journal articles
hal-02990636v1
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Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales
Gang Wu
,
Shingo Miyauchi
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Emmanuelle Morin
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Alan Kuo
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Elodie Drula
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Journal articles
hal-03473169v1
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The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
Dimitrios Floudas
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Manfred Binder
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Robert Riley
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Kerrie Barry
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Robert A. Blanchette
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Journal articles
hal-01268324v1
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Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle
Claude Murat
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Thibaut Payen
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Benjamin Noël
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Alan Kuo
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Emmanuelle Morin
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Journal articles
hal-02094494v1
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
Florian Barbi
,
Annegret Kohler
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Kerrie Barry
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Preetisri Baskaran
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Chris Daum
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Journal articles
hal-02612520v1
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Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits
Shingo Miyauchi
,
Enikő Kiss
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Alan Kuo
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Elodie Drula
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Annegret Kohler
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Journal articles
hal-03082507v1
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Broad Genomic Sampling Reveals a Smut Pathogenic Ancestry of the Fungal Clade Ustilaginomycotina
Teeratas Kijpornyongpan
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Stephen Mondo
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Kerrie Barry
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Laura Sandor
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Juna Lee
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Journal articles
hal-02094578v1
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The Physcomitrella patens gene atlas project: large-scale RNA-seq based expression data
Pierre-François Perroud
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Fabian B. Haas
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Manuel Hiss
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Kristian K. Ullrich
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Alessandro Alboresi
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Journal articles
hal-02622474v1
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