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authFullName_s : Pascal Bonnet

Computational study of ligand-receptor binding process using enhanced molecular dynamics simulations

A. Braka , Samia Aci-Seche , S. Bourg , Norbert Garnier , Pascal Bonnet et al.
21st European Symposium on Quantitative Structure-Activity Relationship, Sep 2016, Vérone, Italy
Conference poster hal-02919149v1
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An original class of small sized molecules as versatile fluorescent probes for cellular imaging

Doina Sirbu , Julien Diharce , Ivana Martinić , Nicolas Chopin , Svetlana Eliseeva et al.
Chemical Communications, 2019, 55 (54), pp.7776-7779. ⟨10.1039/C9CC03765A⟩
Journal articles hal-02373125v1

Synthesis of novel series of 7,7 '-(substituted methylene) bis-imidazo 1,2-b pyrazoles via an acid catalyzed one-pot three-component reaction

Mohsine Driowya , Hassan Allouchi , Jose Manuel Gally , Pascal Bonnet , Gérald Guillaumet et al.
New Journal of Chemistry, 2018, 42 (8), pp.5728-5741. ⟨10.1039/c7nj05088g⟩
Journal articles hal-02620165v1
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Structure-based design of novel quinoxaline-2-carboxylic acids and analogues as Pim-1 inhibitors

Bruno Oyallon , Marie Brachet-Botineau , Cédric Logé , Pascal Bonnet , Mohamed Souab et al.
European Journal of Medicinal Chemistry, 2018, 154, pp.101-109. ⟨10.1016/j.ejmech.2018.04.056⟩
Journal articles hal-03408667v1

Enhanced molecular dynamics methods applied to drug design projects

Sonia Ziada , Abdennour Braka , Julien Diharce , Samia Aci-Seche , Pascal Bonnet et al.
Methods in Molecular Biology, 2018, 1762, pp.403-426. ⟨10.1007/978-1-4939-7756-7_20⟩
Journal articles hal-01966502v1

LIM kinases: new therapeutic targets to treat Neurofibromatosis type I

Béatrice Vallée , Michel Doudeau , Fabienne Godin , Anthony Champiré , Karen Plé et al.
The 7th EMBO meeting, Sep 2016, Mannheim, Germany.
Conference poster hal-02453490v1

Conception of DYRK1A kinase inhibitors via metal-catalyzed C-H arylation, inspired by fragment-growing studies

Florence Couly , Julien Diharce , Pascal Bonnet , Meijer Laurent , Corinne Fruit et al.
International Electronic Conference on Medicinal Chemistry (ECMC, 4, 2018), Jean-Jacques Vanden Eynde (coord.), Nov 2018, [online], Belgium. ⟨10.3390/ecmc-4-05580⟩
Conference papers hal-02383907v1

Specific inhibition of DNMT1/CFP1 reduces cancer phenotypes and enhances chemotherapy effectiveness

Pierre-Francois Cartron , Mathilde Cheray , Arulraj Nadaradjane , Pascal Bonnet , Sylvain Routier et al.
Epigenomics, 2014, 6 (3), pp.267-275. ⟨10.2217/epi.14.18⟩
Journal articles inserm-02478615v1
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Digital technology and agroecology: opportunities to explore, challenges to overcome

Véronique Bellon Maurel , Pascal Bonnet , Isabelle Piot-Lepetit , Ludovic Brossard , Pierre P. Labarthe et al.
Agriculture and Digital Technology: Getting the most out of digital technology to contribute to the transition to sustainable agriculture and food systems, 6, INRIA, pp.76-97, 2022, White book INRIA, 978-2-7261-1310-3
Book sections hal-03606035v2

Development of small molecule inhibitors of LIM kinases, new therapeutic targets to treat Neurofibromatosis type I

Béatrice Vallée , A. Cosson , M. Doudeau , F. Godin , A. Champiré et al.
Joint Global Neurofibromatosis Conference 2018, Nov 2018, Paris, France
Conference poster hal-02924077v1

Synthesis of dihydropyrimidine α,γ-diketobutanoic acid derivatives targeting HIV integrase

Ozkan Sari , Vincent Roy , Mathieu Métifiot , Christophe Marchand , Yves Pommier et al.
European Journal of Medicinal Chemistry, 2015, 104, pp.127-138. ⟨10.1016/j.ejmech.2015.09.015⟩
Journal articles hal-02904762v1

Advanced molecular dynamics simulation methods for kinase drug discovery

Samia Aci-Seche , Sonia Ziada , Abdennour Braka , Rohit Arora , Pascal Bonnet et al.
Future Medicinal Chemistry, 2016, 8 (5), pp.545-566. ⟨10.4155/fmc.16.9⟩
Journal articles hal-02494426v1

Accompagnement scientifique en amont, sur un lieu ressources et en aval d'un séjour scientifique

Maryvonne Priolet , Pascal Bonnet
L'élève, le maître et le scientifique : science et technologie en partage. Colloque national, ASTEP, 2007, Nantes, France
Conference papers hal-02488155v1

VSPrep: A KNIME workflow for the preparation of molecular databases for virtual screening

Jose-Manuel Gally , Stéphane Bourg , Jade Fogha , Quoc-Tuan Do , Samia Aci-Sèche et al.
Current Medicinal Chemistry, 2020, 27 (38), pp.6480-6494. ⟨10.2174/0929867326666190614160451⟩
Journal articles hal-02387324v1

Développement de petites molécules inhibitrices des LIM kinases, nouvelles cibles thérapeutiques pour lutter contre le cancer, les maladies neurologiques et la neurofibromatose

Béatrice Vallée , Karen Plé , A. Cosson , M. Doudeau , F. Godin et al.
Journée Fédération CBM-ICOA, Jan 2018, Orléans, France
Conference papers hal-02928530v1
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Comparative Assessment of Protein Kinase Inhibitors in Public Databases and in PKIDB

Colin Bournez , Fabrice Carles , Gautier Peyrat , Samia Aci-Seche , Stéphane Bourg et al.
Molecules, 2020, 25 (14), pp.3226. ⟨10.3390/molecules25143226⟩
Journal articles hal-02904776v1
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Vers une agriculture numérique en Afrique : enjeux et perspectives

Pascal Bonnet , Mathieu Roche , Hélène Kirchner
Journal of Interdisciplinary Methodologies and Issues in Science, 2021, Digital Agriculture in Africa, ⟨10.18713/JIMIS-120221-8-0⟩
Journal articles hal-03102041v2
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Design, Synthesis and SAR in 2,4,7-Trisubstituted Pyrido[3,2-d]Pyrimidine Series as Novel PI3K/mTOR Inhibitors

Frédéric Buron , Nuno Rodrigues , Thibault Saurat , Marie-Aude Hiebel , Stéphane Bourg et al.
Molecules, 2021, 26 (17), pp.5349. ⟨10.3390/molecules26175349⟩
Journal articles hal-03348966v1

LIM Kinases: new anticancer therapeutic targets

Béatrice Vallée , A. Cosson , M. Doudeau , F. Godin , Anthony Champiré et al.
Breast Cancer Symposium, Jun 2017, Nantes, France
Conference poster hal-03680148v1
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30th Franco-Belgian conference of pharmacochemistry

Charlotte Bouckaert , Eric Goffin , Sebastien Dilly , Julien Hanson , Lionel Pochet et al.
Pharmaceuticals, 2016, 9 (4), pp.73. ⟨10.3390/ph9040073⟩
Journal articles hal-02141338v1

Estimation of Drug-Target Residence Time by Targeted Molecular Dynamics Simulations

Sonia Ziada , Julien Diharce , Eric Raimbaud , Samia Aci-Sèche , Pierre Ducrot et al.
Journal of Chemical Information and Modeling, 2022, ⟨10.1021/acs.jcim.2c00852⟩
Journal articles hal-03855904v1
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Design and biological evaluation of substituted 5,7-dihydro-6 H -indolo[2,3- c ]quinolin-6-one as novel selective Haspin inhibitors

Sreenivas Avula , Xudan Peng , Xingfen Lang , Micky Tortorella , Béatrice Josselin et al.
Journal of Enzyme Inhibition and Medicinal Chemistry, 2022, 37 (1), pp.1632-1650. ⟨10.1080/14756366.2022.2082419⟩
Journal articles hal-03818922v1
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Fr-PPIChem: An Academic Compound Library Dedicated to Protein-Protein Interactions

Nicolas Bosc , Christophe Muller , Laurent Hoffer , David Lagorce , Stéphane Bourg et al.
ACS Chemical Biology, 2020, 15 (6), pp.1566-1574. ⟨10.1021/acschembio.0c00179⟩
Journal articles hal-02569625v1
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In silico peptide ligation: Iterative Residue Docking and Linking as a new approach to predict protein-peptide interactions

Julien Diharce , Mickaël Cueto , Massimiliano Beltramo , Vincent Aucagne , Pascal Bonnet et al.
Molecules, 2019, 24 (7), pp.1-14. ⟨10.3390/molecules24071351⟩
Journal articles hal-03525312v1

VSPrep: A General KNIME Workflow for the Preparation of Molecules for Virtual Screening

José-Manuel Gally , Stéphane Bourg , Quoc-Tuan Do , Samia Aci-Seche , Pascal Bonnet et al.
Molecular Informatics, 2017, 36 (10), pp.1700023. ⟨10.1002/minf.201700023⟩
Journal articles hal-02904764v1
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PrePeP – A Tool for the Identification and Characterization of Pan Assay Interference Compounds

Maksim Koptelov , Albrecht Zimmermann , Pascal Bonnet , Ronan Bureau , Bruno Crémilleux et al.
24th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, Aug 2018, Londres, United Kingdom. pp.462-471, ⟨10.1145/3219819.3219849⟩
Conference papers hal-01939468v1
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Numérique et agro­écologie

Véronique Bellon Maurel , Pascal Bonnet , Isabelle Piot-Lepetit , Ludovic Brossard , Pierre P. Labarthe et al.
Agriculture et numérique : Tirer le meilleur du numérique pour contribuer à la transition vers des agricultures et des systèmes alimentaires durables, 4, INRIA, pp.83-105, 2022, Livre blanc INRIA, 978-2-7261-1310-3
Book sections hal-03654106v1
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Identification of a new series of flavopiridol-like structures as kinase inhibitors with high cytotoxic potency

Nada Ibrahim , Pascal Bonnet , Jean-Daniel Brion , Jean-François Peyrat , Jerome Bignon et al.
European Journal of Medicinal Chemistry, 2020, 199 (31), pp.112355. ⟨10.1016/j.ejmech.2020.112355⟩
Journal articles hal-03036489v1
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Cinchona-based zwitterionic stationary phases: Exploring retention and enantioseparation mechanisms in supercritical fluid chromatography with a fragmentation approach

Adrien Raimbault , Cam Mai Anh Ma , Martina Ferri , Stefanie Bäurer , Pascal Bonnet et al.
Journal of Chromatography A, 2020, 1612, pp.460689. ⟨10.1016/j.chroma.2019.460689⟩
Journal articles hal-02904771v1
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OneARK: Strengthening the links between animal production science and animal ecology

Delphine Destoumieux-Garzón , Pascal Bonnet , Céline Teplitsky , François Criscuolo , Pierre-Yves Henry et al.
Preprints, Working Papers, ... hal-02172445v3