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authFullName_s : Pedro M Coutinho

Genome of the red alga Porphyridium purpureum

Debashish Bhattacharya , Dana C. Price , Cheong Xin Chan , Huan Qiu , Nicholas Rose et al.
Nature Communications, 2013, 4, ⟨10.1038/ncomms2931⟩
Journal articles hal-02650394v1
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Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes

Etienne Danchin , Marie-Noelle Rosso , Paulo Vieira , Janice de Almeida-Engler , Pedro M Coutinho et al.
Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (41), pp.17651-17656
Journal articles hal-02669078v1

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

Emmanuelle Morin , Annegret Kohler , Adam R. Baker , Marie Foulongne-Oriol , Julien Lombard et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (43), pp.17501-17506. ⟨10.1073/pnas.1206847109⟩
Journal articles hal-01267851v1

Des champignons qui carburent: de l'étude du génome à la production industrielle

Marcel M. Asther , Eric Record , Isabelle Gimbert , Jean-Claude Sigoillot , Anthony Levasseur et al.
Biofutur, 2006, 269, pp.28-32
Journal articles hal-02664475v1
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The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion

Jeffrey J. Coleman , Steve D. Rounsley , Marianela Rodriguez-Carres , Alan Kuo , Catherine C. Wasmann et al.
PLoS Genetics, 2009, 5 (8), pp.e1000618
Journal articles hal-02664932v1

A novel unsaturated β-glucuronyl hydrolase involved in ulvan degradation unveils the versatility of stereochemistry requirements in family GH105.

Pi Nyvall Collén , Alexandra Jeudy , Jean-François Sassi , Agnès Groisillier , Mirjam Czjzek et al.
Journal of Biological Chemistry, 2014, 289 (9), pp.6199-211. ⟨10.1074/jbc.M113.537480⟩
Journal articles hal-01002450v1
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A hierarchical classification of polysaccharide lyases for glycogenomics

Vincent Lombard , Thomas Bernard , Corinne Rancurel , Harry Brumer , Pedro M Coutinho et al.
Biochemical Journal, 2010, 432 (3), pp.437-444. ⟨10.1042/BJ20101185⟩
Journal articles hal-00539724v1

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

Li-Jun Ma , Charlotte van Der Does , Katherine A. Borkovich , Jeffrey J. Coleman , Marie-José Daboussi et al.
Nature, 2010, 464 (7287), pp.367-373. ⟨10.1038/nature08850⟩
Journal articles hal-02662964v1

Comparative analyses of Podospora anserina secretomes reveal a large array of lignocellulose-active enzymes.

Laetitia Poidevin , Jean-Guy J.-G. Berrin , Chloé Bennati-Granier , Anthony Levasseur , Isabelle Herpoël-Gimbert et al.
Applied Microbiology and Biotechnology, 2014, 98 (17), pp.7457-7469. ⟨10.1007/s00253-014-5698-3⟩
Journal articles hal-01070025v1

Secretome analysis of Phanerochaete chrysosporium strains CIRM-BRFM41 grown on softwood

Holy Ravaloson , Gwénaël Jan , Daniel Mollé , Maryvonne Pasco , Pedro M Coutinho et al.
Applied Microbiology and Biotechnology, 2008, 80 (4), pp.719-733. ⟨10.1007/s00253-008-1596-x⟩
Journal articles istex hal-01454044v1
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Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5)

Henrik Aspeborg , Pedro M Coutinho , Yang Wang , Harry Brumer , Bernard Henrissat et al.
BMC Evolutionary Biology, 2012, 12, pp.186. ⟨10.1186/1471-2148-12-186⟩
Journal articles hal-01785428v1

Signature active site architectures illuminate the molecular basis for ligand specificity in family 35 carbohydrate binding module

Márcia a S Correia , D Wade Abbott , Tracey M Gloster , Vânia O Fernandes , José a M Prates et al.
Biochemistry, 2010, 49 (29), pp.6193-6205. ⟨10.1021/bi1006139⟩
Journal articles hal-02658065v1
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The genome of the white-rot fungus [i]Pycnoporus cinnabarinus[/i]: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

Anthony Levasseur , Anne Lomascolo , Olivier Chabrol , Francisco J Ruiz-Dueñas , Eva Boukhris-Uzan et al.
BMC Genomics, 2014, 15 (1), pp.486. ⟨10.1186/1471-2164-15-486⟩
Journal articles hal-01204353v1

Gene overexpression and biochemical characterization of the biotechnologically relevant chlorogenic acid hydrolase from Aspergillus niger

Isabelle Benoit , Michèle Asther , Yves Bourne , David Navarro , Stéphane Canaan et al.
Applied and Environmental Microbiology, 2007, 73 (17), pp.5624-5632. ⟨10.1128/AEM.00374-07⟩
Journal articles hal-02658406v1

FOLy: An integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds

Anthony Levasseur , François Piumi , Pedro M Coutinho , Corinne Rancurel , Michèle Asther et al.
Fungal Genetics and Biology, 2008, 45 (5), pp.638-645. ⟨10.1016/j.fgb.2008.01.004⟩
Journal articles istex hal-02666159v1

Correction for Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche (vol 109, pg 17501, 2012)

Emmanuelle Morin , Annegret Kohler , Adam R. Baker , Marie Foulongne-Oriol , Julien Lombard et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (10), pp.4146-4146. ⟨10.1073/pnas.1300201110⟩
Journal articles hal-01268023v1
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Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

Anthony Levasseur , Elodie Drula , Vincent Lombard , Pedro M Coutinho , Bernard Henrissat et al.
Biotechnology for Biofuels, 2013, 6 (41), pp.1-14. ⟨10.1186/1754-6834-6-41⟩
Journal articles hal-01268121v1
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First Structural Insights into α-l-Arabinofuranosidases from the Two GH62 Glycoside Hydrolase Subfamilies

Béatrice Siguier , Mireille Haon , Virginie Nahoum , Marlène Marcellin , Odile Burlet-Schiltz et al.
Journal of Biological Chemistry, 2014, 289 (8), pp.5261-5273. ⟨10.1074/jbc.M113.528133⟩
Journal articles hal-02419708v1
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Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

C André Lévesque , Henk Brouwer , Liliana Cano , John P Hamilton , Carson Holt et al.
Genome Biology, 2010, 11 (7), ⟨10.1186/gb-2010-11-7-r73⟩
Journal articles hal-01605006v1

Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.

Alexandra Z Worden , Jae-Hyeok Lee , Thomas Mock , Pierre Rouzé , Melinda P Simmons et al.
Science, 2009, 324 (5924), pp.268-72. ⟨10.1126/science.1167222⟩
Journal articles hal-00693449v1

Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain

Boyang Ji , Sheng-Da Zhang , Pascal Arnoux , Zoe Rouy , François Alberto et al.
Environmental Microbiology, 2014, 16 (2), pp.525-544. ⟨10.1111/1462-2920.12180⟩
Journal articles istex hal-02463127v1

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

Pierre Abad , Jerome Gouzy , Jean-Marc Aury , Philippe Castagnone , Etienne Danchin et al.
Nature Biotechnology, 2008, 26 (8), pp.909-915. ⟨10.1038/nbt.1482⟩
Journal articles hal-01189285v1
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Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures

Senta Heiss-Blanquet , Francoise M Fayolle-Guichard , Vincent M Lombard , Agnès M Hébert , Pedro M Coutinho et al.
PLoS ONE, 2016, 11 (12), pp.497 - 497. ⟨10.1371/journal.pone.0167216⟩
Journal articles hal-01455050v1

The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria.

Boyang Ji , Sheng-Da Zhang , Wei-Jia Zhang , Zoe Rouy , François Alberto et al.
Environmental Microbiology, 2016, pp.doi: 10.1111/1462-2920.13637. ⟨10.1111/1462-2920.13637⟩
Journal articles hal-01410134v1
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Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

Francis Martin , Annegret Kohler , Claude Murat , Raffaella Balestrini , Pedro M Coutinho et al.
Nature, 2010, 464 (7291), pp.1033-1038. ⟨10.1038/nature08867⟩
Journal articles cea-00907731v1
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A novel, noncatalytic carbohydrate-binding module displays specificity for galactose-containing polysaccharides through calcium-mediated oligomerization

Cédric Montanier , Márcia a S Correia , James E Flint , Yanping Zhu , Arnaud Baslé et al.
Journal of Biological Chemistry, 2011, 286 (25), pp.22499-509. ⟨10.1074/jbc.M110.217372⟩
Journal articles hal-02652804v1

Why are there so many carbohydrate-active enzyme-related genes in plants?

Pedro M Coutinho , Mark Stam , Eric Blanc , Bernard Henrissat
Trends in Plant Science, 2003, 8, pp.563-5
Journal articles inserm-00068898v1
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Closely related fungi employ diverse enzymatic strategies to degrade plant biomass

Isabelle Benoit , Helena Culleton , Miaomiao Zhou , Marcos Difalco , Guillermo Aguilar‑osorio et al.
Biotechnology for Biofuels, 2015, 8, pp.1-14. ⟨10.1186/s13068-015-0285-0⟩
Journal articles hal-01199391v1

The complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition

Immacolata Venditto , Ana S. Luis , Maja G. Rydahl , Julia Schuckel , Vania O. Fernandes et al.
Annual Meeting of the Society for Glycobiology, Nov 2016, New Orleans, LA, United States. 2 p
Conference papers hal-01605176v1
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Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus

Aleksandrina Patyshakuliyeva , Edita Jurak , Annegret Kohler , Adam Baker , Evy Battaglia et al.
BMC Genomics, 2013, 14, ⟨10.1186/1471-2164-14-663⟩
Journal articles hal-01268453v1