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3DClusterViSu: 3D clustering analysis of super-resolution microscopy data by 3D Voronoi tessellations

Leonid Andronov , Jonathan Michalon , Khalid Ouararhni , Igor Orlov , Ali Hamiche et al.
Bioinformatics, 2018, 34 (17), pp.3004-3012. ⟨10.1093/bioinformatics/bty200⟩
Journal articles inserm-02409748v1
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Dual role of histone variant H3.3B in spermatogenesis: positive regulation of piRNA transcription and implication in X-chromosome inactivation

Emeline Fontaine , Christophe Papin , Guillaume Martinez , Stéphanie Le Gras , Roland Abi Nahed et al.
Nucleic Acids Research, 2022, 50 (13), pp.7350-7366. ⟨10.1093/nar/gkac541⟩
Journal articles hal-03852700v1

Phosphorylation of the CENP-A amino-terminus in mitotic centromeric chromatin is required for kinetochore function.

Damien Goutte-Gattat , Muhammad Shuaib , Khalid Ouararhni , Thierry Gautier , Dimitrios Skoufias et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (21), pp.8579-84
Journal articles hal-01322371v1
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CENP-A nucleosome clusters form rosette-like structures around HJURP during G1

Leonid Andronov , Khalid Ouararhni , Isabelle Stoll , Bruno P. Klaholz , Ali Hamiche et al.
Nature Communications, 2019, 10 (1), pp.4436. ⟨10.1038/s41467-019-12383-3⟩
Journal articles inserm-02409790v1
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The NANOTUMOR consortium - Towards the Tumor Cell Atlas

Florent Colin , Kristine Schauer , Ali Hamiche , Pierre Martineau , Jean-Paul Borg et al.
Biology of the Cell, 2021, 113 (6), pp.272-280. ⟨10.1111/boc.202000135⟩
Journal articles hal-03169719v1

The structural plasticity of SCA7 domains defines their differential nucleosome‐binding properties

Jacques Bonnet , Ying‐hui Wang , Gianpiero Spedale , R Andrew Atkinson , Christophe Romier et al.
EMBO Reports, 2010, 11 (8), pp.612-618. ⟨10.1038/embor.2010.98⟩
Journal articles hal-03465202v1

Physical and Functional Interaction between Heterochromatin Protein 1α and the RNA-binding Protein Heterogeneous Nuclear Ribonucleoprotein U

Maya Ameyar-Zazoua , Mouloud Souidi , Lauriane Fritsch , Philippe Robin , Audrey Thomas et al.
Journal of Biological Chemistry, 2009, 284 (41), pp.27974-27979. ⟨10.1074/jbc.M109.037929⟩
Journal articles hal-03051718v1
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The docking domain of histone H2A is required for H1 binding and RSC-mediated nucleosome remodeling.

Manu Shubhdarshan Shukla , Sajad Hussain Syed , Damien Goutte-Gattat , John Lalith Charles Richard , Fabien Montel et al.
Nucleic Acids Research, 2011, 39 (7), pp.2559-70. ⟨10.1093/nar/gkq1174⟩
Journal articles hal-00726345v1
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Dissection of the unusual structural and functional properties of the variant H2A.Bbd nucleosome.

Cécile-Marie Doyen , Fabien Montel , Thierry Gautier , Hervé Menoni , Cyril Claudet et al.
EMBO Journal, 2006, 25 (18), pp.4234-44. ⟨10.1038/sj.emboj.7601310⟩
Journal articles inserm-00335077v1

Mechanism of polymerase II transcription repression by the histone variant macroH2A.

Cécile-Marie Doyen , Woojin An , Dimitar Angelov , Vladimir Bondarenko , Flore Mietton et al.
Molecular and Cellular Biology, 2006, 26, pp.1156-64. ⟨10.1128/MCB.26.3.1156-1164.2006⟩
Journal articles inserm-00091626v1

The NH2 tail of the novel histone variant H2BFWT exhibits properties distinct from conventional H2B with respect to the assembly of mitotic chromosomes.

Matthieu Boulard , Thierry Gautier , Gaelh Ouengue Mbele , Véronique Gerson , Ali Hamiche et al.
Molecular and Cellular Biology, 2006, 26, pp.1518-26. ⟨10.1128/MCB.26.4.1518-1526.2006⟩
Journal articles inserm-00091624v1

SWI/SNF remodeling and p300-dependent transcription of histone variant H2ABbd nucleosomal arrays.

Dimitar Angelov , André Verdel , Woojin An , Vladimir Bondarenko , Fabienne Hans et al.
EMBO Journal, 2004, 23 (19), pp.3815-24. ⟨10.1038/sj.emboj.7600400⟩
Journal articles inserm-00444420v1
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Argonaute proteins couple chromatin silencing to alternative splicing

Maya Ameyar-Zazoua , Christophe Rachez , Mouloud Souidi , Philippe Robin , Lauriane Fritsch et al.
Nature Structural and Molecular Biology, 2012, 19 (10), pp.998 - 1004. ⟨10.1038/nsmb.2373⟩
Journal articles istex pasteur-01393429v1
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Phase-plate cryo-EM structure of the Widom 601 CENP-A nucleosome core particle reveals differential flexibility of the DNA ends

Ramachandran Boopathi , Radostin Danev , Maryam Khoshouei , Seyit Kale , Sunil Nahata et al.
Nucleic Acids Research, 2020, 48 (10), pp.5735-5748. ⟨10.1093/nar/gkaa246⟩
Journal articles hal-03007422v1

ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A.Bbd nucleosomes.

Hervé Menoni , Didier Gasparutto , Ali Hamiche , Jean Cadet , Stefan Dimitrov et al.
Molecular and Cellular Biology, 2007, 27 (17), pp.5949-56. ⟨10.1128/MCB.00376-07⟩
Journal articles inserm-00170196v1

Argonaute proteins couple chromatin silencing to alternative splicing

Maya Ameyar-Zazoua , Christophe Rachez , Mouloud Souidi , Philippe Robin , Lauriane Fritsch et al.
Nature Structural and Molecular Biology, 2012, 19 (10), pp.998-1004. ⟨10.1038/nsmb.2373⟩
Journal articles istex hal-03051682v1

MeCP2 is a microsatellite binding protein that protects CA repeats from nucleosome invasion

Abdulkhaleg Ibrahim , Christophe Papin , Kareem Mohideen-Abdul , Stéphanie Le Gras , Isabelle Stoll et al.
Science, 2021, 372 (6549), ⟨10.1126/science.abd5581⟩
Journal articles inserm-03376640v1
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Thymoquinone challenges UHRF1 to commit auto-ubiquitination: a key event for apoptosis induction in cancer cells

Abdulkhaleg Ibrahim , Mahmoud Alhosin , Christophe Papin , Khalid Ouararhni , Ziad Omran et al.
Oncotarget, 2018, 9 (47), pp.28599-28611. ⟨10.18632/oncotarget.25583⟩
Journal articles hal-03661555v1

Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.

Jan Bednar , Isabel Garcia-Saez , Ramachandran Boopathi , Amber R Cutter , Gabor Papai et al.
Molecular Cell, 2017, 66 (5), pp.729. ⟨10.1016/j.molcel.2017.05.018⟩
Journal articles hal-01537811v1
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Cryo-electron microscopy of the chromatin fiber

Ramachandran Boopathi , Stefan Dimitrov , Ali Hamiche , Carlo Petosa , Jan Bednar et al.
Current Opinion in Structural Biology, 2020, 64, pp.97-103. ⟨10.1016/⟩
Journal articles hal-02947617v1

Molecular basis and specificity of H2A.Z–H2B recognition and deposition by the histone chaperone YL1

Chrysa Latrick , Martin Marek , Khalid Ouararhni , Christophe Papin , Isabelle Stoll et al.
Nature Structural and Molecular Biology, 2016, 23 (4), pp.309-316. ⟨10.1038/nsmb.3189⟩
Journal articles hal-02294249v1

Nucleolin is a histone chaperone with FACT-like activity and assists remodeling of nucleosomes.

Dimitar Angelov , Vladimir A Bondarenko , Sébastien Almagro , Hervé Menoni , Fabien Mongelard et al.
EMBO Journal, 2006, 25, pp.1669-79. ⟨10.1038/sj.emboj.7601046⟩
Journal articles inserm-00091623v1
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TIP60 governs the auto-ubiquitination of UHRF1 through USP7 dissociation from the UHRF1/USP7 complex

Tanveer Ahmad , Waseem Ashraf , Abdulkhaleg Ibrahim , Liliyana Zaayter , Christian D. Muller et al.
International Journal of Oncology, 2021, 59 (5), ⟨10.21203/⟩
Journal articles hal-03035702v1