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Extensive characterization of NF-κB binding uncovers non-canonical motifs and advances the interpretation of genetic functional traits

Daniel Wong , Ana Teixeira , Spyros Oikonomopoulos , Peter Humburg , Imtiaz Nisar Lone et al.
Genome Biology, 2011, 12 (7), pp.R70
Journal articles ensl-00814796v1
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Dual role of histone variant H3.3B in spermatogenesis: positive regulation of piRNA transcription and implication in X-chromosome inactivation

Emeline Fontaine , Christophe Papin , Guillaume Martinez , Stéphanie Le Gras , Roland Abi Nahed et al.
Nucleic Acids Research, 2022, 50 (13), pp.7350-7366. ⟨10.1093/nar/gkac541⟩
Journal articles hal-03852700v1

H1–nucleosome interactions and their functional implications

Ali Hamiche , Jan Bednar , Stefan Dimitrov
Biochimica et Biophysica Acta - Gene Regulatory Mechanisms , 2016, 1859 (3), pp.436-443. ⟨10.1016/j.bbagrm.2015.10.012⟩
Journal articles hal-03484327v1

The Role of Histone Variants in the Epithelial-To-Mesenchymal Transition

Ali Hamiche , Imtiaz Nisar Lone , Burcu Sengez , Stefan Dimitrov , Hani Alotaibi et al.
Cells, 2020, 9 (11), pp.2499. ⟨10.3390/cells9112499⟩
Journal articles hal-03484306v1

pEg2 aurora-A kinase, histone H3 phosphorylation, and chromosome assembly in Xenopus egg extract.

Laetitia Scrittori , Fabienne Hans , Dimitar Angelov , Monique Charra , Claude Prigent et al.
Journal of Biological Chemistry, 2001, 276 (32), pp.30002-10. ⟨10.1074/jbc.M102701200⟩
Journal articles inserm-00966192v1

The NH2 tail of the novel histone variant H2BFWT exhibits properties distinct from conventional H2B with respect to the assembly of mitotic chromosomes.

Matthieu Boulard , Thierry Gautier , Gaelh Ouengue Mbele , Véronique Gerson , Ali Hamiche et al.
Molecular and Cellular Biology, 2006, 26, pp.1518-26. ⟨10.1128/MCB.26.4.1518-1526.2006⟩
Journal articles inserm-00091624v1

Mechanism of polymerase II transcription repression by the histone variant macroH2A.

Cécile-Marie Doyen , Woojin An , Dimitar Angelov , Vladimir Bondarenko , Flore Mietton et al.
Molecular and Cellular Biology, 2006, 26, pp.1156-64. ⟨10.1128/MCB.26.3.1156-1164.2006⟩
Journal articles inserm-00091626v1

SWI/SNF remodeling and p300-dependent transcription of histone variant H2ABbd nucleosomal arrays.

Dimitar Angelov , André Verdel , Woojin An , Vladimir Bondarenko , Fabienne Hans et al.
EMBO Journal, 2004, 23 (19), pp.3815-24. ⟨10.1038/sj.emboj.7600400⟩
Journal articles inserm-00444420v1

Cell cycle regulated expression of NCoR might control cyclic expression of androgen responsive genes in an immortalized prostate cell line

D.M. Altintas , V. Vlaeminck , Dimitar Angelov , Stefan Dimitrov , Jacques Samarut et al.
Molecular and Cellular Endocrinology, 2011, 332 (1-2), pp.149-162
Journal articles ensl-00808297v1

A small C-terminal sequence of Aurora B is responsible for localization and function.

Laetitia Scrittori , Dimitrios A Skoufias , Fabienne Hans , Véronique Gerson , Paolo Sassone-Corsi et al.
Molecular Biology of the Cell, 2005, 16 (1), pp.292-305. ⟨10.1091/mbc.E04-06-0447⟩
Journal articles hal-00187757v1

Functions of the histone chaperone nucleolin in diseases.

Sébastien Storck , Manu Shukla , Stefan Dimitrov , Philippe Bouvet
Sub-cellular biochemistry, 2007, 41, pp.125-144
Journal articles hal-00337699v1

Histone variant nucleosomes: structure, function and implication in disease.

Matthieu Boulard , Philippe Bouvet , Tapas K. Kundu , Stefan Dimitrov
Sub-cellular biochemistry, 2007, 41, pp.71-89
Journal articles hal-00337627v1

The histone variant mH2A1.1 interferes with transcription by down-regulating PARP-1 enzymatic activity.

Khalid Ouararhni , Réda Hadj-Slimane , Slimane Ait-Si-Ali , Philippe Robin , Flore Mietton et al.
Genes and Development, 2006, 20 (23), pp.3324-36. ⟨10.1101/gad.396106⟩
Journal articles inserm-00105117v1

Extra views on structure and dynamics of DNA loops on nucleosomes studied with molecular simulations

Marco Pasi , Dimitar Angelov , Jan Bednar , Stefan Dimitrov , Richard Lavery et al.
Nucleus, 2016, 7 (6), pp.554 - 559. ⟨10.1080/19491034.2016.1260800⟩
Journal articles hal-01601410v1

Phosphorylation of the CENP-A amino-terminus in mitotic centromeric chromatin is required for kinetochore function.

Damien Goutte-Gattat , Muhammad Shuaib , Khalid Ouararhni , Thierry Gautier , Dimitrios Skoufias et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (21), pp.8579-84
Journal articles hal-01322371v1
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H2A.Z is dispensable for both basal and activated transcription in post-mitotic mouse muscles

Edwige Belotti , Nicolas Lacoste , Thomas Simonet , Christophe Papin , Kiran Padmanabhan et al.
Nucleic Acids Research, 2020, 48 (9), pp.4601 - 4613. ⟨10.1093/nar/gkaa157⟩
Journal articles hal-02537773v1
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Phase-plate cryo-EM structure of the Widom 601 CENP-A nucleosome core particle reveals differential flexibility of the DNA ends

Ramachandran Boopathi , Radostin Danev , Maryam Khoshouei , Seyit Kale , Sunil Nahata et al.
Nucleic Acids Research, 2020, 48 (10), pp.5735-5748. ⟨10.1093/nar/gkaa246⟩
Journal articles hal-03007422v1

Phosphorylation of serine 10 in histone H3, what for?

Claude Prigent , Stefan Dimitrov
Journal of Cell Science, 2003, 116 (Pt 18), pp.3677-85. ⟨10.1242/jcs.00735⟩
Journal articles inserm-00966495v1

Base excision repair of 8-oxoG in dinucleosomes

Hervé Menoni , Manu Shubhdarshan Shukla , Véronique Gerson , Stefan Dimitrov , Dimitar Angelov et al.
Nucleic Acids Research, 2011, 40 (2), pp.692-700
Journal articles ensl-00807713v1

Remosomes: RSC generated non-mobilized particles with approximately 180 bp DNA loosely associated with the histone octamer

Manu Shubhdarshan Shukla , Sajad Hussain Syed , Fabien Montel , Cendrine Faivre-Moskalenko , Jan Bednar et al.
Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (5), pp.1936-1941
Journal articles ensl-00817658v1

Histone H3.3 regulates mitotic progression in mouse embryonic fibroblasts

Ali Hamiche , Aysegul Ors , Christophe Papin , Bertrand Favier , Yohan Roulland et al.
Biochemistry and Cell Biology, 2017, 95 (4), pp.491-499. ⟨10.1139/bcb-2016-0190⟩
Journal articles hal-03484321v1

The Flexible Ends of CENP-A Nucleosome Are Required for Mitotic Fidelity

Ali Hamiche , Yohan Roulland , Khalid Ouararhni , Mladen Naidenov , Lorrie Ramos et al.
Molecular Cell, 2016, 63 (4), pp.674-685. ⟨10.1016/j.molcel.2016.06.023⟩
Journal articles hal-03484326v1

Direct cooperation between androgen receptor and E2F1 reveals a common regulation mechanism for androgen-responsive genes in prostate cells.

D.M. Altintas , Manu Shubhdarshan Shukla , Damien Goutte-Gattat , Dimitar Angelov , J.P. Rouault et al.
Molecular Endocrinology -Baltimore-, 2012, 26 (9), pp.1531-1541
Journal articles ensl-00807488v1

Combinatorial DNA methylation codes at repetitive elements

Ali Hamiche , Christophe Papin , Abdulkhaleg Ibrahim , Stéphanie Le Gras , Amandine Velt et al.
Genome Research, 2017, 27 (6), pp.934-946. ⟨10.1101/gr.213983.116⟩
Journal articles hal-03484320v1

Single-base resolution mapping of H1-nucleosome interactions and 3D organization of the nucleosome

Sajad Hussain Syed , Damien Goutte-Gattat , Nils Becker , Sam Meyer , Manu Shubhdarshan Shukla et al.
Proceedings of the National Academy of Sciences of the United States of America, 2010, 107 (21), pp.9620-9625
Journal articles ensl-00817666v1

ANP32E is a histone chaperone that removes H2A.Z from chromatin

Ali Hamiche , Arnaud Obri , Khalid Ouararhni , Christophe Papin , Marie-Laure Diebold et al.
Nature, 2014, 505 (7485), pp.648-653. ⟨10.1038/nature12922⟩
Journal articles hal-03450114v1

Molecular basis and specificity of H2A.Z–H2B recognition and deposition by the histone chaperone YL1

Chrysa Latrick , Martin Marek , Khalid Ouararhni , Christophe Papin , Isabelle Stoll et al.
Nature Structural and Molecular Biology, 2016, 23 (4), pp.309-316. ⟨10.1038/nsmb.3189⟩
Journal articles hal-02294249v1

CpG Islands Shape the Epigenome Landscape

Christophe Papin , Stéphanie Le Gras , Abdulkhaleg Ibrahim , Hatem Salem , Mohammad Mahdi Karimi et al.
Journal of Molecular Biology, 2021, 433 (6), pp.166659. ⟨10.1016/j.jmb.2020.09.018⟩
Journal articles hal-03450118v1

Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.

Jan Bednar , Isabel Garcia-Saez , Ramachandran Boopathi , Amber R Cutter , Gabor Papai et al.
Molecular Cell, 2017, 66 (5), pp.729. ⟨10.1016/j.molcel.2017.05.018⟩
Journal articles hal-01537811v1

Centromeric histone variant CENP-A represses acetylation-dependent chromatin transcription that is relieved by histone chaperone NPM1.

Jayasha Shandilya , Parijat Senapati , Fabienne Hans , Hervé Menoni , Philippe Bouvet et al.
Journal of Biochemistry, 2014, 156 (4), pp.221-7
Journal articles hal-01130583v1