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Bacterial-fungal interactions: ecology, mechanisms and challenges

Aurélie Deveau , Gregory Bonito , Jessie Uehling , Mathieu Paoletti , Matthias Becker et al.
FEMS Microbiology Reviews, 2018, 42 (3), pp.335-352. ⟨10.1093/femsre/fuy008⟩
Journal articles hal-01954717v1

Genetic determinants of endophytism in the Arabidopsis root mycobiome

Fantin Mesny , Shingo Miyauchi , Thorsten Thiergart , Brigitte Pickel , Lea Atanasova et al.
Nature Communications, 2021, 12 (1), pp.7227. ⟨10.1038/s41467-021-27479-y⟩
Journal articles hal-03508738v1

Erratum: Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

Stéphane Hacquard , Barbara Kracher , Kei Hiruma , Philipp C. Münch , Ruben Garrido-Oter et al.
Nature Communications, 2016, 7, ⟨10.1038/ncomms13072⟩
Journal articles hal-01412262v1
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Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

Richard J O'Connell , Michael R Thon , Stéphane Hacquard , Stefan G Amyotte , Jochem Kleeman et al.
Nature Genetics, 2012, 44 (09), pp.1060-1065. ⟨10.1038/ng.2372⟩
Journal articles hal-01191183v1
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Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

Stéphane Hacquard , Barbara Kracher , Kei Hiruma , Philipp C. Münch , Ruben Garrido-Oter et al.
Nature Communications, 2016, 7, pp.1-12. ⟨10.1038/ncomms11362⟩
Journal articles hal-01412501v1

Toward a better understanding of the plant microbiota

Victoria Potdevin , Marie Chevallier , Ruben Garrido Oter , Anne Siegel , Stéphane Hacquard et al.
4ème colloque de Génomique Environnementale, GDR Génomique Environnementale, Sep 2017, Marseille, France
Conference papers hal-01576743v1
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Critical Assessment of Metagenome Interpretation: the second round of challenges

Fernando Meyer , Adrian Fritz , Zhi-Luo Deng , David Koslicki , Till Robin Lesker et al.
Nature Methods, 2022, 19 (4), pp.429-440. ⟨10.1038/s41592-022-01431-4⟩
Journal articles hal-03832903v1
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Climate drives rhizosphere microbiome variation and divergent selection between geographically distant Arabidopsis populations

Paloma Durán , Thomas James Ellis , Thorsten Thiergart , Jon Ågren , Stéphane Hacquard et al.
New Phytologist, 2022, 236 (2), pp.608-621. ⟨10.1111/nph.18357⟩
Journal articles hal-03863618v1
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Microbial Systems Ecology to Understand Cross-Feeding in Microbiomes

Victor Mataigne , Nathan Vannier , Philippe Vandenkoornhuyse , Stephane Hacquard
Frontiers in Microbiology, 2021, 12, pp.780469. ⟨10.3389/fmicb.2021.780469⟩
Journal articles hal-03552682v1