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instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

Lyam Baudry , Nadège Guiglielmoni , Hervé Marie-Nelly , Alexandre Cormier , Martial Marbouty et al.
Genome Biology, 2020, 21 (1), ⟨10.1186/s13059-020-02041-z⟩
Journal articles pasteur-02873422v1

Marine Genomics and the Exploration of Marine Biodiversity

J. Mark Cock , Delphine Scornet , Susana M. Coelho , Bénédicte Charrier , Catherine Boyen et al.
Duatre, C.M. The exploration of Marine Biodiversity, 117-141, BBVA Foundation, Bilbao, Spain, 2006, 84-96515-27-3
Book sections hal-03443467v1
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DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus

Olivier Godfroy , Toshiki Uji , Chikako Nagasato , Agnieszka Lipinska , Delphine Scornet et al.
The Plant cell, 2018, 29 (12), pp.3102-3122. ⟨10.1105/tpc.17.00440⟩
Journal articles hal-03145763v1

Genetic and developmental mechanisms of cellular differentiation in algae. In: The Evolution of Multicellularity. Matthew D. Herron, Peter Conlin, and William C. Ratcliff. (eds) Evolutionary Cell Biology series

Susana M. Coelho , J. Mark Cock
CRC Press, 1, 2022, ⟨10.1201/9780429351907⟩
Books hal-03814810v1
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Chromosome-level quality scaffolding of brown algal genomes using InstaGRAAL, a proximity ligation-based scaffolder

Lyam Baudry , Martial Marbouty , Hervé Marie-Nelly , Alexandre Cormier , Nadège Guiglielmoni et al.
Preprints, Working Papers, ... hal-02947625v1
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A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp.

Sophia S. Ahmed , J. Mark Cock , Eugenie Pessia , Remy Luthringer , Alexandre Cormier et al.
Current Biology - CB, 2014, 24 (17), pp.1945-1957. ⟨10.1016/j.cub.2014.07.042⟩
Journal articles hal-01132642v1
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Development of PCR‐Based Markers to Determine the Sex of Kelps

Agnieszka Lipinska , Sophia Ahmed , Akira F Peters , Sylvain Faugeron , J. Mark Cock et al.
PLoS ONE, 2015, 10 (10), pp.e0140535. ⟨10.1371/journal.pone.0140535⟩
Journal articles hal-01226462v1
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Histone modifications during the life cycle of the brown alga Ectocarpus

Simon Bourdareau , Leila Tirichine , Damarys Loew , Delphine Scornet , Yue Wu et al.
Genome Biology, 2021
Journal articles hal-03084385v1
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Genetic Diversity in the UV Sex Chromosomes of the Brown Alga Ectocarpus

Komlan Avia , Agnieszka P Lipinska , Laure Mignerot , Alejandro Montecinos , Mahwash Jamy et al.
Genes, 2018, 9 (6), pp.286. ⟨10.3390/genes9060286⟩
Journal articles hal-03145778v1
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Sexual Dimorphism and the Evolution of Sex-Biased Gene Expression in the Brown Alga Ectocarpus

Agnieszka Lipinska , Alexandre Cormier , Remy Luthringer , Akira F Peters , Erwan Corre et al.
Molecular Biology and Evolution, 2015, 32 (6), pp.1581-1597. ⟨10.1093/molbev/msv049⟩
Journal articles hal-01285048v1
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Brown Algal Model Organisms

Susana M Coelho , J. Mark Cock
Annual Review of Genetics, 2020
Journal articles hal-03082916v1
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Evolution and maintenance of haploid-diploid life cycles in natural populations: the case of the marine brown alga Ectocarpus

Lucia Couceiro , Mickael Le Gac , Heather M. Hunsperger , Stéphane Mauger , Christophe Destombe et al.
Evolution - International Journal of Organic Evolution, 2015, 69 (7), pp.1808-1822. ⟨10.1111/evo.12702⟩
Journal articles hal-01167462v1
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Non-cell autonomous regulation of life cycle transitions in the model brown alga Ectocarpus.

Alok Arun , Nick T Peters , Delphine Scornet , Akira F Peters , J. Mark Cock et al.
New Phytologist, 2013, 197 (2), pp.503-10. ⟨10.1111/nph.12007⟩
Journal articles hal-01071265v1
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The origin and evolution of the sexes: Novel insights from a distant eukaryotic linage

Laure Mignerot , Susana M. Coelho
Comptes Rendus Biologies, 2016, ⟨10.1016/j.crvi.2016.04.012⟩
Journal articles hal-01323858v1

Ecological and evolutionary genomics of marine photosynthetic organisms.

Susana M Coelho , Nathalie Simon , Sophia Ahmed , J Mark Cock , Frédéric Partensky et al.
Molecular Ecology, 2013, 22 (3), pp.867-907. ⟨10.1111/mec.12000⟩
Journal articles hal-00817749v1
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Haiqin Yao , Delphine Scornet , Murielle Jam , Cécile Hervé , Philippe Potin et al.
Journal of Phycology, 2021, 57 (3), pp.742-753. ⟨10.1111/jpy.13126⟩
Journal articles hal-03089431v1