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The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
Aurélien Naldi
,
Céline Hernandez
,
Nicolas Levy
,
Gautier Stoll
,
Pedro Monteiro
et al.
Journal articles
hal-01794294v2
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Genetic Network Analyzer: A Tool for the Qualitative Simulation of Genetic Regulatory Networks
Hidde de Jong
,
Johannes Geiselmann
,
Céline Hernandez
,
Michel Page
[Research Report] RR-4262, INRIA. 2001
Reports
inria-00072325v1
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Qualitative simulation of the initiation of sporulation in Bacillus subtilis.
Hidde de Jong
,
Johannes Geiselmann
,
Grégory Batt
,
Céline Hernandez
,
Michel Page
et al.
Journal articles
istex
hal-00173847v1
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Benchmarking joint multi-omics dimensionality reduction approaches for cancer study
Laura Cantini
,
Pooya Zakeri
,
Céline Hernandez
,
Aurelien Naldi
,
Denis Thieffry
et al.
2020
Preprints, Working Papers, ...
hal-02998156v1
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Qualitative Simulation of the Initiation of Sporulation in B. subtilis
Hidde De jong
,
Johannes Geiselmann
,
Grégory Batt
,
Céline Hernandez
,
Michel Page
et al.
[Research Report] RR-4527, INRIA. 2002
Reports
inria-00072061v1
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Contribution of ROS and metabolic status to neonatal and adult CD8 + T cell activation
José Antonio Sánchez-Villanueva
,
Otoniel Rodríguez-Jorge
,
Oscar Ramirez-Pliego
,
Gabriela Rosas Salgado
,
Wassim Abou-Jaoudé
et al.
Journal articles
inserm-02428783v1
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Prediction of Mutations to Control Pathways Enabling Tumour Cell Invasion with the CoLoMoTo Interactive Notebook (Tutorial)
Nicolas Levy
,
Aurélien Naldi
,
Céline Hernandez
,
Gautier Stoll
,
Denis Thieffry
et al.
Journal articles
hal-01809081v1
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FAIR_bioinfo : a software perspective of reproducibility of bioinformatics analyses
Thomas Denecker
,
Céline Hernandez
,
Claire Toffano-Nioche
Journées Ouvertes de Biologie Informatique et Mathématiques - JOBIM 2020, Jun 2020, Montpellier, France
Conference poster
hal-03071717v1
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Benchmarking joint multi-omics dimensionality reduction approaches for the study of cancer
Laura Cantini
,
Pooya Zakeri
,
Céline Hernandez
,
Aurelien Naldi
,
Denis Thieffry
et al.
Journal articles
hal-03102088v1
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The Drosophila Fab-7 boundary element modulates Abd-B gene activity in the genital disc by guiding an inversion of collinear chromatin organization and alternative promoter use
Laura Moniot-Perron
,
Benoit Moindrot
,
Line Manceau
,
Joanne Edouard
,
Yan Jaszczyszyn
et al.
2022
Preprints, Working Papers, ...
hal-03818695v1
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RSAT 2015: Regulatory Sequence Analysis Tools
Alejandra Medina-Rivera
,
Matthieu Defrance
,
Olivier Sand
,
Carl Herrmann
,
Jaime A. Castro-Mondragon
et al.
Journal articles
hal-01624369v1
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Quantitative proteomics identifies the membrane-associated peroxidase GPx8 as a cellular substrate of the hepatitis C virus NS3-4A protease.
Kenichi Morikawa
,
Jérôme Gouttenoire
,
Céline Hernandez
,
Viet Loan Dao Thi
,
Huong T L Tran
et al.
Journal articles
hal-00972312v1
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Cooperation between T cell receptor and Toll-like receptor 5 signaling for CD4 + T cell activation
Otoniel Rodríguez-Jorge
,
Linda Kempis-Calanis
,
Wassim Abou-Jaoudé
,
Darely Gutiérrez-Reyna
,
Céline Hernandez
et al.
Journal articles
hal-02154906v1
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Krox20 hindbrain regulation incorporates multiple modes of cooperation between cis-acting elements
Elodie Thierion
,
Johan Le Men
,
Samuel Collombet
,
Céline Hernandez
,
Fanny Coulpier
et al.
Journal articles
inserm-02158641v1
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Qualitative simulation of genetic regulatory networks using piecewise-linear models.
Hidde de Jong
,
Jean-Luc Gouzé
,
Céline Hernandez
,
Michel Page
,
Tewfik Sari
et al.
Journal articles
hal-00173849v1
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Qualitative Simulation of Genetic Regulatory Networks Using Piecewise-Linear Models
Hidde De Jong
,
Jean-Luc Gouzé
,
Céline Hernandez
,
Tewfik Sari
,
Michel Page
et al.
[Research Report] RR-4407, INRIA. 2002
Reports
inria-00072181v1
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Eoulsan 2: an efficient workflow manager for reproducible bulk, long-read and single-cell transcriptomics analyses
Nathalie Lehmann
,
Sandrine Perrin
,
Claire Wallon
,
Xavier Bauquet
,
Vivien Deshaies
et al.
2021
Preprints, Working Papers, ...
hal-03784195v1
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