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authIdHal_s : daniel-jacob65

On-going method developments in Bordeaux Metabolome Facility

Stéphane Bernillon , Benoit Biais , Catherine C. Deborde , Laetitia Fouillen , Yvon Guntz et al.
Metabolomics 2013 - 9. Annual conference of the Metabolomics Society, Jun 2013, Glasgow, United Kingdom. 2013
Conference poster hal-02804388v1
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Document for adding numbered structures into PeakForest

Cécile Canlet , Catherine Deborde , Daniel Jacob , Mounir Traïkia , Lindsay Peyriga et al.
2021
Preprints, Working Papers, ... hal-03411869v1
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NMR-Based Tissular and Developmental Metabolomics of Tomato Fruit

Martine Lemaire-Chamley , Fabien F. Mounet , Catherine Deborde , Mickael Maucourt , Daniel Jacob et al.
Metabolites, 2019, 9 (5), pp.93. ⟨10.3390/metabo9050093⟩
Journal articles hal-02621416v1

LC-MS and NMR metabolomics study of a tomato (Solanum lycopersicum L.) mutant affected in the fruit pericarp development

Constance Musseau , Stéphane Bernillon , Catherine Deborde , Daniel Jacob , Joana Jorly et al.
12. Journées Scientifiques du RFMF, May 2019, Clermont-Ferrand, France. pp.128/P48, 2019, 12. Journées Scientifiques du RFMF
Conference poster hal-02556782v1

Cleaning-in-place coupled with membrane regeneration for re-using caustic soda solutions

Geneviève Gésan-Guiziou , Nicolas Alvarez , Daniel Jacob , Georges Daufin
Separation and Purification Technology, 2007, 54 (3), pp.329-339. ⟨10.1016/j.seppur.2006.10.007⟩
Journal articles istex hal-01453993v1

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

Christophe Plomion , Céline C. Lalanne , Stéphane Claverol , Hakim Meddour , Annegret Kohler et al.
Proteomics, 2006, 6 (24), pp.6509-6527. ⟨10.1002/pmic.200600362⟩
Journal articles istex hal-02663888v1

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications

Catherine C. Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon , Thierry Berton et al.
10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016
Conference poster hal-02743906v1
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MetaboHUB-Bordeaux

Stéphane Bernillon , Cecile Cabasson , Cédric Cassan , Grégory da Costa , Catherine Deborde et al.
Journées Scientifiques INRA-BAP, Sep 2019, Hyères, France. , 2019, ⟨10.15454/1.5572412770331912E12⟩
Conference poster hal-02570809v1
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RMN métabolomique, aliments & nutrition : quelques exemples de la plateforme Métabolome-MetaboHUB -Bordeaux

Catherine Deborde , Blandine Madji Hounoum , Simon Roques , Daniel Jacob , Mickaël Maucourt et al.
Animation scientifique : La Résonance Magnétique Nucléaire dans tous ses états…., UR370 QuaPA et PF AgroResonance, INRAE, Jun 2021, distanciel, France
Conference papers hal-03728319v1
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Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

Thomas Dussarrat , Sylvain Prigent , Claudio Latorre , Stéphane Bernillon , Amélie Flandin et al.
New Phytologist, 2022, 234 (5), pp.1614-1628. ⟨10.1111/nph.18095⟩
Journal articles hal-03626433v1

Plant metabolism as studied by NMR spectroscopy

Catherine Deborde , Annick Moing , Léa Roch , Daniel Jacob , Dominique Rolin et al.
Progress in Nuclear Magnetic Resonance Spectroscopy, 2017, 102-103, pp.61-97. ⟨10.1016/j.pnmrs.2017.05.001⟩
Journal articles hal-01602524v1

Insights into genome plasticity of the wine-making bacterium Oenococcus oeni strain ATCC BAA-1163 by decryption of its whole genome.

Elisabeth Bon , Cosette Granvalet , Fabienne Remize , Diliana Dimova , Patrick Lucas et al.
9th Symposium on Lactic Acid Bacteria, Sep 2008, Egmond aan Zee, Netherlands. pp.A047
Conference papers inria-00340073v1

The complete genome sequence of the human urogenital mycoplasma, Mycoplasma hominis

Sabine Pereyre , Philippe Avenaud , Alain Charron , Pascal P. Sirand-Pugnet , Daniel Jacob et al.
16. International congress of the International Organization for Mycoplasmology, Jul 2006, Cambridge, United Kingdom
Conference papers hal-02756026v1

Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systems

Cecile Cabasson , Sophie Colombie , Bertrand Beauvoit , Christine Nazaret , Camille Benard et al.
Colloque Biologie synthétique et systémique, BioSynSys, Jun 2016, Bordeaux, France
Conference papers hal-02739719v1
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Precision requirements for space-based data

C. Miller , D. Crisp , P. Decola , S. Olsen , J. Randerson et al.
Journal of Geophysical Research: Atmospheres, 2007, 112 (D10), ⟨10.1029/2006JD007659⟩
Journal articles hal-03191467v1

Precautions of a revisited protocol for 1D 1H-NMR profiling of plant samples from extract preparation to spectra processing. Preliminary results of an inter laboratory experiments.

Jean-Xavier J.-X. Fontaine , Roland Molinié , Catherine Deborde , Adolfo Botana , Francois Mesnard et al.
11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P34, 2018, 11. Journées Scientifiques du RFMF
Conference poster hal-03125729v1
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Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis

Maria Urrutia , Melisande Blein-Nicolas , Sylvain Prigent , Stéphane Bernillon , Catherine Deborde et al.
Plant, Cell and Environment, 2021, 44 (5), pp.1504-1521. ⟨10.1111/pce.13993⟩
Journal articles hal-03107184v1

Characterization of GMO or glyphosate effects on the composition of maize grain and maize-based diet for rat feeding

Stéphane Bernillon , Mickael Maucourt , Sylvain Chéreau , Catherine Deborde , Daniel Jacob et al.
12. Journées Scientifiques du RFMF, May 2019, Clermont-Ferrand, France. pp.109 /P30, 2019, 12. Journées Scientifiques du RFMF
Conference poster hal-02556668v1
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An efficient spectra processing method for metabolite identification from (1)H-NMR metabolomics data.

Daniel Jacob , Catherine C. Deborde , Annick Moing
Analytical and Bioanalytical Chemistry, 2013, 405, pp.5049-5061. ⟨10.1007/s00216-013-6852-y⟩
Journal articles istex hal-02648547v1
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MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles.

Hélène Ferry-Dumazet , Laurent Gil , Catherine Deborde , Annick Moing , Stéphane Bernillon et al.
BMC Plant Biology, 2011, 11, pp.104. ⟨10.1186/1471-2229-11-104⟩
Journal articles hal-00645944v1
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TOWARDS A METABOLOMIC CHARACTERISATION OF THE GRAPEVINE RESPONSE TO FLAVESCENCE DORÉE INFECTION BY NMR AND LC-MS PROFILING

Catherine Deborde , Stéphane Bernillon , Josep Valls Fonayet , Daniel Jacob , Sylvie Malembic-Maher et al.
Analytics 2022, Sep 2022, Nantes, France. ⟨10.15454/1.5572412770331912E12⟩
Conference poster hal-03728111v1

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB IA project. Tools and Applications

Annick Moing , Catherine C. Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon et al.
8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014
Conference poster hal-02799366v1
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NMR-based metabolomics workflow for quality and effect assessment of alternative plant-based diets in rainbow trout.

Catherine Deborde , Blandine Madji Hounoum , Daniel Jacob , Mickael Maucourt , Simon Roques et al.
11èmes JS du Réseau Francophone de Métabolomique et Fluxomique, May 2018, Liège, Belgium
Conference papers hal-03058513v1
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Workflow4Metabolomics: A collaborative research infrastructure for computational metabolomics

Mélanie Pétéra , Gildas Le Corguille , Marion Landi , Misharl Monsoor , Marie A Tremblay-Franco et al.
JOBIM 2015 (16e édition des Journées Ouvertes en Biologie, Informatique et Mathématiques ), Jul 2015, Clermont-Ferrand, France. , 2015, JOBIM (16e édition des Journées Ouvertes en Biologie, Informatique et Mathématiques ). ⟨10.1093/bioinformatics/btu813⟩
Conference poster hal-01214152v1
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PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management

Nils Paulhe , Cécile Canlet , Annelaure Damont , Lindsay Peyriga , Stéphanie Durand et al.
Metabolomics, 2022, 18 (6), pp.40. ⟨10.1007/s11306-022-01899-3⟩
Journal articles hal-03695453v1

An integrative genomics approach for deciphering the complex interactions between ascorbate metabolism and fruit growth and composition in tomato.

Virginie Garcia , Rebecca Stevens , Laurent Gil , Louise Gilbert , Noé Gest et al.
Comptes Rendus Biologies, 2009, 332 (11), pp.1007-21. ⟨10.1016/j.crvi.2009.09.013⟩
Journal articles hal-00645936v1
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FAIRness Literacy: The Achilles’ Heel of Applying FAIR Principles

Romain David , Laurence Mabile , Alison Specht , Sarah Stryeck , Mogens Thomsen et al.
CODATA Data Science Journal, 2020, 19 (32), pp.1-11. ⟨10.5334/dsj-2020-032⟩
Journal articles hal-02483307v2
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Complete Genome Sequence of Mycoplasma putrefaciens Strain 9231, One of the Agents of Contagious Agalactia in Goats

Virginie Dupuy , Pascal Sirand-Pugnet , Eric Baranowski , Aurélien Barré , Marc Breton et al.
Genome Announcements, 2013, 1 (3), pp.e00354-13. ⟨10.1128/genomeA.00354-13⟩
Journal articles hal-00907450v1
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New tools and workflows on W4M, the Galaxy metabolomic infrastructure

Marion Landi , Claire Lopez , Marie A Tremblay-Franco , Cécile Canlet , Yann Guitton et al.
9e Journées scientifiques du RFMF, Jun 2015, Lille, France. , 2015
Conference poster hal-02743697v1

The Metabolome pole of the Functional Genomics Platform of Bordeaux

Catherine C. Deborde , Stéphane Bernillon , Cécile Cabasson , Mickael M. Maucourt , Christel Renaud et al.
2. Journées, Dec 2006, Saint Sauves d'Auvergne, France
Conference papers hal-02753989v1