Search - Archive ouverte HAL Access content directly

Filter your results

23 Results
authIdHal_s : elodie-laine
Image document

Dissecting protein architecture with communication blocks and communicating segment pairs

Yasaman Karami , Elodie Laine , Alessandra Carbone
BMC Bioinformatics, 2016, 17 (S2), pp.133-148. ⟨10.1186/s12859-015-0855-y⟩
Journal articles hal-01260475v1
Image document

Decrypting protein surfaces by combining evolution, geometry, and molecular docking

Chloé Dequeker , Elodie Laine , Alessandra Carbone
Proteins - Structure, Function and Bioinformatics, 2019, 87 (11), pp.952-965. ⟨10.1002/prot.25757⟩
Journal articles hal-02321652v1

Allosteric pathway identification through network analysis: from molecular dynamics simulations to interactive 2d and 3d graphs

Arian Allain , Isaure Chauvot de Beauchêne , Florent Langenfeld , Yann Guarracino , Elodie Laine et al.
Faraday Discussions, 2014, ⟨10.1039/c4fd00024b⟩
Journal articles hal-01505837v1

Raltegravir flexibility and its impact on recognition by the HIV-1 IN targets.

Rohit Arora , Isaure Chauvot de Beauchêne , Jaroslaw Polansky , Elodie Laine , Luba Tchertanov et al.
Journal of Molecular Recognition, 2013, ⟨10.1002/jmr.2277⟩
Journal articles istex hal-01505872v1

Decrypting how protein move and change their shape

Elodie Laine
Proceeding of 16th International Symposium on Mathematical and Computational Biology, 2017
Book sections hal-01587939v1
Image document

Analyse de l'activation du facteur oedémateux de Bacillus anthracis par la calmoduline, en vue de la recherche d'inhibiteurs

Elodie Laine
Médicaments. Université Pierre et Marie Curie - Paris VI, 2009. Français. ⟨NNT : ⟩
Theses tel-00483602v1
Image document

ASES: visualizing evolutionary conservation of alternative splicing in proteins

Diego Javier Zea , Hugues Richard , Elodie Laine
Bioinformatics, 2022, 38 (9), pp.2615-2616. ⟨10.1093/bioinformatics/btac105⟩
Journal articles hal-03695534v1
Image document

Predicting substitutions to modulate disorder and stability in coiled-coils

Yasaman Karami , Paul Saighi , Rémy Vanderhaegen , Denis Gerlier , Sonia Longhi et al.
Preprints, Working Papers, ... hal-03022522v1
Image document

Targeting Solute Carrier Transporters through Functional Mapping

Claire Colas , Elodie Laine
Trends in Pharmacological Sciences, 2020, ⟨10.1016/⟩
Journal articles hal-03033584v1
Image document

INTerface Builder: a fast protein-protein interface reconstruction tool

Chloé Dequeker , Elodie Laine , Alessandra Carbone
Journal of Chemical Information and Modeling, 2017, ⟨10.1021/acs.jcim.7b00360⟩
Journal articles hal-01617113v1

Meet-U: Educating through research immersion

Nika Abdollahi , Alexandre Albani , Eric Anthony , Agnes Baud , Mélissa Cardon et al.
PLoS Computational Biology, 2018, 14 (3), pp.e1005992. ⟨10.1371/journal.pcbi.1005992⟩
Journal articles hal-04011118v1

Alignment-based protein mutational landscape prediction: doing more with less

Marina Abakarova , Céline Marquet , Michael Rera , Burkhard Rost , Elodie Laine et al.
Preprints, Working Papers, ... hal-03903639v1
Image document

GEMME: A Simple and Fast Global Epistatic Model Predicting Mutational Effects

Elodie Laine , Yasaman Karami , Alessandra Carbone
Molecular Biology and Evolution, 2019, 36 (11), pp.2604-2619. ⟨10.1093/molbev/msz179⟩
Journal articles hal-02431792v1
Image document

Deep Local Analysis evaluates protein docking conformations with locally oriented cubes

Yasser Mohseni Behbahani , Simon Crouzet , Elodie Laine , Alessandra Carbone
Bioinformatics, 2022, 38 (19), pp.4505-4512. ⟨10.1093/bioinformatics/btac551⟩
Journal articles hal-03906697v1

Alignment-based protein mutational landscape prediction: doing more with less

Marina Abakarova , Céline Marquet , Michael Rera , Burkhard Rost , Elodie Laine et al.
Preprints, Working Papers, ... hal-03907222v1
Image document

Hotspot mutations in KIT receptor differentially modulate its allosterically coupled conformational dynamics: impact on activation and drug sensitivity

Ariane Allain , Isaure Chauvot de Beauchêne , Nicolas Panel , Elodie Laine , Alain Trouvé et al.
PLoS Computational Biology, 2014, 10 (7), pp.e1003749. ⟨10.1371/journal.pcbi.1003749⟩
Journal articles hal-01505833v1
Image document

Assessing Conservation of Alternative Splicing with Evolutionary Splicing Graphs

Diego Javier Zea , Sofya Laskina , Alexis Baudin , Hugues Richard , Elodie Laine et al.
Genome Research, In press
Journal articles hal-03274456v1
Image document

From complete cross-docking to partners identification and binding sites predictions

Chloé Dequeker , Yasser Mohseni Behbahani , Laurent David , Elodie Laine , Alessandra Carbone et al.
PLoS Computational Biology, 2022, 18 (1), pp.e1009825. ⟨10.1371/journal.pcbi.1009825⟩
Journal articles hal-03549513v1
Image document

Predicting protein functional motions: an old recipe with a new twist

Sergei Grudinin , Elodie Laine , Alexandre Hoffmann
Biophysical Journal, 2020, 118 (10), pp.2513-2525. ⟨10.1016/j.bpj.2020.03.020⟩
Journal articles hal-02291552v1
Image document

Local Geometry and Evolutionary Conservation of Protein Surfaces Reveal the Multiple Recognition Patches in Protein-Protein Interactions

Elodie Laine , Alessandra Carbone
PLoS Computational Biology, 2015, 11 (12), pp.e1004580. ⟨10.1371/journal.pcbi.1004580⟩
Journal articles hal-01274084v1
Image document

Transcripts’ Evolutionary History and Structural Dynamics Give Mechanistic Insights into the Functional Diversity of the JNK Family

Adel Ait-Hamlat , Diego Javier Zea , Antoine Labeeuw , Lélia Polit , Hugues Richard et al.
Journal of Molecular Biology, 2020, 432 (7), pp.2121-2140. ⟨10.1016/j.jmb.2020.01.032⟩
Journal articles hal-02884145v1

Mutation D816V alters the internal structure and dynamics of c-KIT receptor cytoplasmic region: implications for dimerization and activation mechanisms

Elodie Laine , Isaure Chauvot de Beauchêne , David Perahia , Christian Auclair , Luba Tchertanov et al.
PLoS Computational Biology, 2011, ⟨10.1371/journal.pcbi.1002068⟩
Journal articles hal-01505755v1
Image document

Multiple Profile Models Extract Features from Protein Sequence Data and Resolve Functional Diversity of Very Different Protein Families

R. Vicedomini , J.P. Bouly , E. Laine , A. Falciatore , A. Carbone et al.
Molecular Biology and Evolution, 2022, 39 (4), ⟨10.1093/molbev/msac070⟩
Journal articles hal-03850479v1