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REHH 2.0: a reimplementation of the R package REHH to detect positive selection from haplotype structure
Mathieu Gautier
,
Alexander Klassmann
,
Renaud Vitalis
Journal articles
hal-01607599v1
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The genomic basis of colour pattern polymorphism in the harlequin ladybird
Mathieu Gautier
,
Junichi Yamaguchi
,
Julien Foucaud
,
Anne Loiseau
,
Aurélien Ausset
et al.
2020
Preprints, Working Papers, ...
hal-02791082v1
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Private Selective Sweeps Identified from Next-Generation Pool-Sequencing Reveal Convergent Pathways under Selection in Two Inbred Schistosoma mansoni Strains.
Julie a J Clément
,
Eve Toulza
,
Mathieu Gautier
,
Hugues Parrinello
,
David Roquis
et al.
Journal articles
hal-00938922v1
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The worldwide invasion of Drosophila suzukii is accompanied by a large increase of transposable element load and a small number of putatively adaptive insertions
Vincent Mérel
,
Patricia Gibert
,
Inessa Buch
,
Valentina Rodriguez Rada
,
Arnaud Estoup
et al.
Journal articles
hal-03015267v2
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Near-chromosome level genome assembly of the fruit pest Drosophila suzukii using long-read sequencing
Mathilde Paris
,
Roxane Boyer
,
Rita Jaenichen
,
Jochen Wolf
,
Marianthi Karageorgi
et al.
Journal articles
hal-02908174v1
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Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping.
Mathieu Gautier
,
Julien Foucaud
,
Karim Gharbi
,
Timothée Cézard
,
Maxime Galan
et al.
Journal articles
istex
hal-00860608v1
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Initial French experience of percutaneous mitral valve repair with the MitraClip: A multicentre national registry
Xavier Armoiry
,
Eric Brochet
,
Thierry Lefevre
,
Patrice Guerin
,
Nicolas Dumonteil
et al.
Journal articles
hal-01814471v1
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Empirical assessment of RAD sequencing for interspecific phylogeny
Astrid Cruaud
,
Mathieu M. Gautier
,
Maxime Galan
,
Julien Foucaud
,
Laure Sauné
et al.
Journal articles
hal-02638415v1
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A novel locus on chromosome 1 underlies the evolution of a melanic plumage polymorphism in a wild songbird
Yann X. C. Bourgeois
,
Boris Delahaie
,
Mathieu Gautier
,
Emeline Lhuillier
,
Pierre-Jean G. Malé
et al.
Journal articles
hal-01603958v1
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Exploring systematic biases, rooting methods and morphological evidence to unravel the evolutionary history of the genus Ficus (Moraceae)
Jean-Yves Rasplus
,
Lillian Jennifer Rodriguez
,
Laure Sauné
,
Yang-Qiong Peng
,
Anthony Bain
et al.
Journal articles
hal-03051462v1
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A whole-genome scan for association with invasion success in the fruit fly Drosophila suzukii using contrasts of allele frequencies corrected for population structure
Laure Olazcuaga
,
Anne Loiseau
,
Hugues Parrinello
,
Mathilde Paris
,
Antoine Fraimout
et al.
Journal articles
hal-02563272v1
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Phenotypic measurements and study of the polymorphism of candidate genes for the fertility QTL of chromosome 3 in the Prim'holstein breed
P. Humblot
,
Mathieu M. Gautier
,
Tom T. Druet
,
Yves Amigues
,
Bénédicte Grimard
et al.
du séminaire AgenaeGenanimal, 15-16 octobre 2007, Oct 2007, Dourdan
Conference papers
hal-02750987v1
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Comment la coccinelle arlequin dessine-t-elle ses points rouges ou ses points noirs ?
Arnaud A Estoup
,
Mathieu Gautier
,
B. Prud’homme
2018, 1 p
Other publications
hal-02789608v1
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The evolution and population diversity of bison in pleistocene and holocene eurasia: sex matters
Thierry Grange
,
Jean-Philip Brugal
,
Laurence Flori
,
Mathieu Gautier
,
Antigone Uzunidis
et al.
Journal articles
hal-01974602v1
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Rehh: an R package to detect footprints of selection in genome-wide SNP data from haplotype structure
Mathieu M. Gautier
,
Renaud Vitalis
Journal articles
hal-02648143v1
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Identification by R-banding and FISH of chromosome arms involved in Robertsonian translocations in several deer species
Amélie Bonnet-Garnier
,
F. Claro
,
S. Thevenon
,
Mathieu M. Gautier
,
Hélène Hayes
et al.
Journal articles
istex
hal-02682511v1
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Fertilité : déterminisme génétique et étude métabolique des problèmes de fertilité des vaches laitières hautes productrices
Joëlle Dupont
,
Lucie Tosca
,
Philippe Monget
,
Mathieu M. Gautier
,
Andre A. Eggen
et al.
Séminaire AGENAE : Analyse du Genome des Animaux d'Elevage, Mar 2006, Poitiers, France. pp.40-41
Conference papers
hal-02812888v1
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A model-based approach to characterize individual inbreeding at both global and local genomic scales
T. Druet
,
Mathieu Gautier
Journal articles
hal-01605680v1
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Deciphering the Wisent Demographic and Adaptive Histories from Individual Whole-Genome Sequences
Mathieu Gautier
,
Katayoun Moazami-Goudarzi
,
Hubert H. Levéziel
,
Hugues Parrinello
,
Cécile Grohs
et al.
Journal articles
hal-02506852v1
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Divergence of olfactory receptors associated with the evolution of assortative mating and reproductive isolation in mice
Carole M Smadja
,
Etienne Loire
,
Pierre Caminade
,
Dany Severac
,
Mathieu Gautier
et al.
2022
Preprints, Working Papers, ...
hal-03864612v1
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La recette génétique des pois rouges ou noirs de la coccinelle
Arnaud A Estoup
,
Mathieu Gautier
,
B. Prud’homme
2018, 1 p
Other publications
hal-02786767v1
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FLPCA: A Fused Lasso PCA-based approach to identify influential markers in differentiated populations from dense SNP data
Denis Laloë
,
Julien Chiquet
,
Florence Jaffrezic
,
Mathieu M. Gautier
International Biometric Conference, Jul 2014, Firenze, Italy
Conference papers
hal-02798952v1
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Du génotype au phénotype : les motifs des coccinelles arlequins
Mathieu Gautier
,
Benjamin Prud’homme
,
Junichi Yamaguchi
,
Arnaud A Estoup
Ressources en sciences de la vie pour les enseignants, 2018
Scientific blog post
hal-02787178v1
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Inferring Population Histories Using Genome-Wide Allele Frequency Data
Mathieu Gautier
,
Renaud Vitalis
Journal articles
hal-00783026v1
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Positive selection of protective variants for type 2 diabetes from the Neolithic onward: a case study in Central Asia
Laure Ségurel
,
Frédéric Austerlitz
,
Bruno Toupance
,
Mathieu M. Gautier
,
Joanna L Kelley
et al.
Journal articles
hal-02120826v1
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Inferring sex-specific demographic history from SNP data
Florian Clemente
,
Mathieu Gautier
,
Renaud Vitalis
Journal articles
hal-02388049v1
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Identifying genomic hotspots of differentiation and candidate genes involved in the adaptive divergence of pea aphid host races
Pierre Nouhaud
,
Mathieu Gautier
,
Anaïs Gouin
,
Julie Jaquiéry
,
Jean Peccoud
et al.
Journal articles
hal-01892027v1
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Atypical structure and phylogenomic evolution of the new eutherian oocyte- and embryo-expressed KHDC1/DPPA5/ECAT1/OOEP gene family
Alice Pierre
,
Mathieu M. Gautier
,
I. Callebaut
,
Martine Bontoux
,
Eric Jeanpierre
et al.
Genomics, 2007, 90 (5), pp.583-594
Journal articles
hal-02666732v1
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C-Nap1 mutation affects centriole cohesion and is associated with a Seckel-like syndrome in cattle
Sandrine Floriot
,
Christine Vesque
,
Sabrina Rodriguez
,
Florence Bourgain-Guglielmetti
,
Anthi Karaiskou
et al.
Journal articles
hal-01194104v1
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Large-scale candidate gene scan reveals the role of chemoreceptor genes in host plant specialization and speciation in the pea aphid
Carole Smadja
,
Björn Canbäck
,
Renaud Vitalis
,
Mathieu Gautier
,
Julia Ferrari
et al.
Journal articles
hal-02652662v1
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