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Structure: Internal structure identifier : 1005021
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Impact of anticancer chemotherapy on the extension of beta-lactamase spectrum: an example with KPC-type carbapenemase activity towards ceftazidime-avibactam

Claire Amaris Hobson , Stéphane Bonacorsi , Didier Hocquet , André Baruchel , Mony Fahd et al.
Scientific Reports, 2020, 10 (1), pp.589. ⟨10.1038/s41598-020-57505-w⟩
Journal articles inserm-02490753v1
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Phylogenetic background and habitat drive the genetic diversification of Escherichia coli

Marie Touchon , Amandine Perrin , Jorge A Moura de Sousa , Belinda Vangchhia , Samantha Burn et al.
PLoS Genetics, 2020, 16 (6), pp.e1008866. ⟨10.1371/journal.pgen.1008866⟩
Journal articles pasteur-02866790v2

Epidemiology Update for Hepatitis C Virus and Hepatitis B Virus in End-Stage Renal Disease in France

Corinne Isnard Bagnis , Cécile Couchoud , Marc Bowens , Ayman Sarraj , Gilbert Deray et al.
Liver International, 2017, 37 (6), pp.820--826. ⟨10.1111/liv.13367⟩
Journal articles hal-03846529v1
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Mycobacterium chimaera genomics with regard to epidemiological and clinical investigations conducted for the open-chest post-surgical Mycobacterium chimaera infections outbreak

Emmanuel Lecorche , Côme Daniau , Kevin La , Faiza Mougari , Hanaa Benmansour et al.
Open Forum Infectious Diseases, 2021, ⟨10.1093/ofid/ofab192/6228983⟩
Journal articles hal-03202563v1
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Distinct systemic and mucosal immune responses to SARS-CoV-2

Nikaïa Smith , Pedro Goncalves , Bruno Charbit , Ludivine Grzelak , Maxime Beretta et al.
Preprints, Working Papers, ... pasteur-03244398v1
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Moderate Certainty Evidence Suggests the Use of High-Flow Nasal Cannula Does Not Decrease Hypoxia When Compared With Conventional Oxygen Therapy in the Peri-Intubation Period

Dipayan Chaudhuri , David Granton , Dominic Xiang Wang , Sharon Einav , Yigal Helviz et al.
Critical Care Medicine, 2020, 48 (4), pp.571-578. ⟨10.1097/CCM.0000000000004217⟩
Journal articles hal-02436055v1
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Le réservoir viral dans l’infection par le VIH-2, modèle d’une infection rétrovirale atténuée

Assia Samri , Charlotte Charpentier , Rémi Cheynier , Sophie Matheron , Françoise Brun-Vézinet et al.
médecine/sciences, 2020, 36 (4), pp.336-339. ⟨10.1051/medsci/2020046⟩
Journal articles hal-02903922v1
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Quantifying the relationship between SARS-CoV-2 viral load and infectiousness

Aurélien Marc , Marion Kerioui , François Blanquart , Julie Bertrand , Oriol Mitjà et al.
eLife, 2021, 10, ⟨10.7554/eLife.69302⟩
Journal articles hal-03405884v1
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The Use of Translational Modelling and Simulation to Develop Immunomodulatory Therapy as an Adjunct to Antibiotic Treatment in the Context of Pneumonia

Robin Michelet , Moreno Ursino , Sandrine Boulet , Sebastian Franck , Fiordiligie Casilag et al.
Pharmaceutics, 2021, 13 (5), pp.601. ⟨10.3390/pharmaceutics13050601⟩
Journal articles hal-03215662v1
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Nosocomial transmission clusters and lineage diversity characterized by SARS-CoV-2 genomes from two large hospitals in Paris, France, in 2020

Valentin Leducq , Aude Jary , Antoine Bridier-Nahmias , Lena Daniel , Karen Zafilaza et al.
Scientific Reports, 2022, 12 (1), pp.1094. ⟨10.1038/s41598-022-05085-2⟩
Journal articles hal-03541502v1

Clinical recurrences of COVID-19 symptoms after recovery: Viral relapse, reinfection or inflammatory rebound?

Marie Gousseff , Pauline Penot , Laure Gallay , Dominique Batisse , Nicolas Benech et al.
Journal of Infection, 2020, 81 (5), pp.816-846. ⟨10.1016/j.jinf.2020.06.073⟩
Journal articles hal-03080302v1
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Multicenter evaluation of a syndromic rapid multiplex PCR test for early adaptation of antimicrobial therapy in adult patients with pneumonia

Celine Monard , Jonathan Pehlivan , Gabriel Auger , Sophie Alviset , Alex Tran Dinh et al.
Critical Care, 2020, 24 (1), pp.434. ⟨10.1186/s13054-020-03114-y⟩
Journal articles hal-02927325v1
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Connection between two historical tuberculosis outbreak sites in Japan, Honshu, by a new ancestral Mycobacterium tuberculosis L2 sublineage

Christophe Guyeux , Gaetan Senelle , Guislaine Refrégier , Florence Bretelle-Establet , Emmanuelle Cambau et al.
Epidemiology and Infection, 2022, 150, pp.e56. ⟨10.1017/S0950268822000048⟩
Journal articles hal-03924496v1
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Correction to: What are the effective solutions to control the dissemination of antibiotic resistance in the environment? A systematic review protocol

Anais Goulas , Barbara Livoreil , Nathalie Grall , Pierre Benoit , Céline Couderc-Obert et al.
Environmental Evidence, 2019, 8 (1), pp.35. ⟨10.1186/s13750-019-0179-x⟩
Journal articles hal-02876738v1

Why the application of IVIG might be beneficial in patients with COVID-19 – Authors' reply

Aurélien Mazeraud , Michel Wolff , Bruno Lucas , Tarek Sharshar
The Lancet Respiratory Medicine, 2022, 10 (2), pp.e16. ⟨10.1016/S2213-2600(21)00550-6⟩
Journal articles hal-03894519v1
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Rifapentine access in Europe: growing concerns over key tuberculosis treatment component

Lorenzo Guglielmetti , Gunar Günther , Claude Leu , Daniela Cirillo , Raquel Duarte et al.
European Respiratory Journal, 2022, 59 (5), pp.2200388. ⟨10.1183/13993003.00388-2022⟩
Journal articles hal-03689715v1

Deciphering polymorphism in 61,157 Escherichia coli genomes via epistatic sequence landscapes

Lucile Vigué , Giancarlo Croce , Marie Petitjean , Etienne Ruppé , Olivier Tenaillon et al.
Nature Communications, 2022, 13 (1), pp.4030. ⟨10.1038/s41467-022-31643-3⟩
Journal articles hal-03721049v1

AI-based mobile application to fight antibiotic resistance

Marco Pascucci , Guilhem Royer , Jakub Adamek , Mai Al Asmar , David Aristizabal et al.
Nature Communications, 2021, 12 (1), pp.1173. ⟨10.1038/s41467-021-21187-3⟩
Journal articles hal-03706771v1
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HIV-phyloTSI: Subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data

Tanya Golubchik , Lucie Abeler-Dörner , Matthew Hall , Chris Wymant , David Bonsall et al.
Preprints, Working Papers, ... hal-03835696v1
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Community-acquired infection caused by the uncommon hypervirulent Klebsiella pneumoniae ST66-K2 lineage

Carla Rodrigues , Camille d'Humières , Grégory Papin , Virginie Passet , Etienne Ruppé et al.
Microbial Genomics, 2020, 6 (8), ⟨10.1099/mgen.0.000419⟩
Journal articles pasteur-03329236v1

Effect of a Diagnostic Strategy Using an Elevated and Age-Adjusted D-Dimer Threshold on Thromboembolic Events in Emergency Department Patients With Suspected Pulmonary Embolism

Yonathan Freund , Anthony Chauvin , Sonia Jimenez , Anne-Laure Philippon , Sonja Curac et al.
JAMA Cardiology, 2021, 326 (21), pp.2141. ⟨10.1001/jama.2021.20750⟩
Journal articles hal-03986117v1
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A Conceptual Discussion about R0 of SARS-COV-2 in Healthcare Settings

Laura Temime , Marie-Paule Gustin , Audrey Duval , Niccolò Buetti , Pascal Crepey et al.
Clinical Infectious Diseases, 2021, pp.ciaa682. ⟨10.1093/cid/ciaa682⟩
Journal articles hal-02859847v1
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Systematic and quantitative view of the antiviral arsenal of prokaryotes

Florian Tesson , Alexandre Hervé , Ernest Mordret , Marie Touchon , Camille D’humières et al.
Nature Communications, 2022, 13 (1), pp.2561. ⟨10.1038/s41467-022-30269-9⟩
Journal articles hal-03823827v2
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Epidemiology and control of SARS-CoV-2 epidemics in partially vaccinated populations: a modeling study applied to France

Paolo Bosetti , Cécile Tran Kiem , Alessio Andronico , Vittoria Colizza , Yazdan Yazdanpanah et al.
BMC Medicine, 2022, 20 (1), pp.33. ⟨10.1186/s12916-022-02235-1⟩
Journal articles hal-03906324v3
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Prevalence of Post-Acute COVID-19 Symptoms Twelve Months after Hospitalisation in Participants Retained in Follow-up: Analyses Stratified by Gender from a Large Prospective Cohort

Jade Ghosn , Delphine Bachelet , Marine Livrozet , Minerva Cervantes-Gonzalez , Julien Poissy et al.
Clinical Microbiology and Infection, 2023, 29 (2), pp.254.e7-254.e13. ⟨10.1016/j.cmi.2022.08.028⟩
Journal articles hal-03801797v1
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Inhaled ciclesonide for outpatient treatment of COVID-19 in adults at risk of adverse outcomes: a randomised controlled trial (COVERAGE)

Alexandre Duvignaud , Edouard Lhomme , Racha Onaisi , Rémi Sitta , Ambre Gelley et al.
Clinical Microbiology and Infection, 2022, 28 (7), pp.1010-1016. ⟨10.1016/j.cmi.2022.02.031⟩
Journal articles hal-03690132v1
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Investigating drug resistance of Mycobacterium leprae in the Comoros: an observational deep-sequencing study

Sofie Marijke Braet , Agathe Jouet , Alexandra Aubry , Magalie van Dyck-Lippens , Esteban Lenoir et al.
The Lancet Microbe, 2022, 3 (9), pp.e693-e700. ⟨10.1016/S2666-5247(22)00117-3⟩
Journal articles hal-03837115v1
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Impact of systematic whole-body 18F-fluorodeoxyglucose PET/CT on the management of patients suspected of infective endocarditis: the prospective multicenter TEPvENDO study

Xavier Duval , Vincent Le Moing , Sarah Tubiana , Marina Esposito-Farèse , Emila Ilic-Habensus et al.
Clinical Infectious Diseases, 2021, 73 (3), pp.393-403. ⟨10.1093/cid/ciaa666⟩
Journal articles hal-02893638v1
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Early control of viral load by favipiravir promotes survival to Ebola virus challenge and prevents cytokine storm in non-human primates

Stéphanie Reynard , Emilie Gloaguen , Nicolas Baillet , Vincent Madelain , Jérémie Guedj et al.
PLoS Neglected Tropical Diseases, 2021, 15 (3), pp.e0009300. ⟨10.1371/journal.pntd.0009300⟩
Journal articles pasteur-03236111v1
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Severe acute respiratory syndrome coronavirus 2-related multisystem inflammatory syndrome in children mimicking Kawasaki disease

Jean Christophe Mercier , Naïm Ouldali , Isabelle Melki , Romain Basmaci , Michael Levy et al.
Archives of cardiovascular diseases, 2021, 114 (5), pp.426-433. ⟨10.1016/j.acvd.2021.04.005⟩
Journal articles inserm-03408069v1