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Conformational Insights into the Control of CNF1 Toxin Activity by Peptidyl-Prolyl Isomerization: A Molecular Dynamics Perspective

Eléa Paillares , Maud Marechal , Léa Swistak , Landry Tsoumtsa Meda , Emmanuel Lemichez et al.
International Journal of Molecular Sciences, 2021, 22 (18), pp.10129. ⟨10.3390/ijms221810129⟩
Journal articles pasteur-03351201v1
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Redesign of iPPI-DB, a database for modulators of Protein-Protein Interactions

Rachel Torchet , Alexandra Moine-Franel , Hélène Borges , Bryan Brancotte , Olivia Doppelt-Azeroual et al.
JOBIM (Journées Ouvertes Biologie, Informatique et Mathématiques), Société Française de BioInformatique; GdR Bioinformatique Moléculaire; Institut Francais de Bioinformatique, Jul 2019, Nantes, France
Conference papers pasteur-02867265v1
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Identification of recessive lethal alleles in the diploid genome of a candida albicans laboratory strain unveils a potential role of repetitive sequences in buffering their deleterious impact.

Timea Marton , Adeline Feri , Pierre-Henri Commere , Corinne Maufrais , Christophe d'Enfert et al.
MSphere, 2019, 4 (1), pp.e00709-18. ⟨10.1128/mSphere.00709-18⟩
Journal articles hal-02619101v1

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

N. R. Faria , J. Quick , I. M. Claro , Julien Thézé , J. G. de Jesus et al.
Nature, 2017, 546, pp.406-410. ⟨10.1038/nature22401⟩
Journal articles hal-02629317v1

Natural selection contributed to immunological differences between hunter-gatherers and agriculturalists

Genelle F. Harrison , Joaquin Sanz , Jonathan Boulais , Michael Mina , Jean-Christophe Grenier et al.
Nature Ecology & Evolution, 2019, 3 (8), pp.1253-1264. ⟨10.1038/s41559-019-0947-6⟩
Journal articles pasteur-02549704v1
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Concomitant emergence of the antisense protein gene of HIV-1 and of the pandemic

Elodie Cassan , Anne-Muriel Arigon Chifolleau , Jean-Michel Mesnard , Antoine Gross , Olivier Gascuel et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (41), pp.11537-11542. ⟨10.1073/pnas.1605739113⟩
Journal articles lirmm-01397005v1
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Chromosome-level quality scaffolding of brown algal genomes using InstaGRAAL, a proximity ligation-based scaffolder

Lyam Baudry , Martial Marbouty , Hervé Marie-Nelly , Alexandre Cormier , Nadège Guiglielmoni et al.
2021
Preprints, Working Papers, ... hal-02947625v1
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Importance of mosquito "quasispecies" in selecting an epidemic arthropod-borne virus.

Marie Vazeille , Karima Zouache , Anubis Vega-Rúa , Jean-Michel Thiberge , Valérie Caro et al.
Scientific Reports, 2016, 6, pp.29564. ⟨10.1038/srep29564⟩
Journal articles pasteur-01457825v1
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Using serological studies to reconstruct the history of bluetongue epidemic in French cattle under successive vaccination campaigns

Noémie Courtejoie , Henrik Salje , Benoît Durand , Gina Zanella , Simon Cauchemez et al.
Epidemics, 2018, 25, pp.54-60. ⟨10.1016/j.epidem.2018.05.005⟩
Journal articles pasteur-03430087v1
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Genome-wide association study in 79,366 European-ancestry individuals informs the genetic architecture of 25-hydroxyvitamin D levels

Xia Jiang , Paul F. O'Reilly , Hugues Aschard , Yi-Hsiang Hsu , J. Brent Richards et al.
Nature Communications, 2018, 9 (1), pp.260. ⟨10.1038/s41467-017-02662-2⟩
Journal articles pasteur-03278560v1
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Deciphering the genetic control of gene expression following Mycobacterium leprae antigen stimulation

Jérémy Manry , Yohann Nédélec , Vinicius M Fava , Aurélie Cobat , Marianna Orlova et al.
PLoS Genetics, 2017, 13 (8), pp.e1006952. ⟨10.1371/journal.pgen.1006952⟩
Journal articles pasteur-01658370v1
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ImJoy: an open-source computational platform for the deep learning era

Wei Ouyang , Florian Mueller , Martin Hjelmare , Emma Lundberg , Christophe Zimmer et al.
Nature Methods, 2019, 16 (12), pp.1199-1200. ⟨10.1038/s41592-019-0627-0⟩
Journal articles pasteur-02401584v1
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The Loss of Expression of a Single Type 3 Effector (CT622) Strongly Reduces Chlamydia trachomatis Infectivity and Growth

Mathilde M Cossé , Michael Barta , Derek Fisher , Lena K Oesterlin , Béatrice Niragire et al.
Frontiers in Cellular and Infection Microbiology, 2018, 8, pp.145. ⟨10.3389/fcimb.2018.00145⟩
Journal articles pasteur-01909386v1

Human thymopoiesis is influenced by a common genetic variant within the TCRA-TCRD locus

Emmanuel Clave , Itauá Leston Araujo , Cécile Alanio , Etienne Patin , Jacob Bergstedt et al.
Science Translational Medicine, 2018, 10 (457), pp.eaao2966. ⟨10.1126/scitranslmed.aao2966⟩
Journal articles pasteur-01880378v1
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Virtual Reality: Beyond Visualization

Mohamed El Beheiry , Sébastien Doutreligne , Clément Caporal , Cecilia Ostertag , Maxime Dahan et al.
Journal of Molecular Biology, 2019, 431 (7), pp.1315-1321. ⟨10.1016/j.jmb.2019.01.033⟩
Journal articles pasteur-02872135v1
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La psychiatrie : les enjeux pour les neurosciences intégratives

Guillaume Dumas , Jean-Arthur Micoulaud-Franchi
Intellectica - La revue de l’Association pour la Recherche sur les sciences de la Cognition (ARCo), 2019, Les neurosciences au sein des sciences de la cognition entre neuroenthousiasme et neuroscepticisme, 69 (1-2), pp.237 - 262
Journal articles pasteur-02070416v1
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Associations of autozygosity with a broad range of human phenotypes

David J. Clark , Yukinori Okada , Kristjan Moore , Dan Mason , Nicola Pirastu et al.
Nature Communications, 2019, 10 (1), pp.4957. ⟨10.1038/s41467-019-12283-6⟩
Journal articles hal-02651737v1
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Data structures based on k-mers for querying large collections of sequencing datasets

Camille Marchet , Christina Boucher , Simon J Puglisi , Paul Medvedev , Mikaël Salson et al.
2019
Preprints, Working Papers, ... hal-02414162v1
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The Anopheles gambiae 2La chromosome inversion is associated with susceptibility to Plasmodium falciparum in Africa.

Michelle M Riehle , Tullu Bukhari , Awa Gneme , Wamdaogo M Guelbeogo , Boubacar Coulibaly et al.
eLife, 2017, 6, pp.e25813. ⟨10.7554/eLife.25813⟩
Journal articles pasteur-01567815v1
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Recent Adaptive Acquisition by African Rainforest Hunter-Gatherers of the Late Pleistocene Sickle-Cell Mutation Suggests Past Differences in Malaria Exposure

Guillaume Laval , Stéphane Peyrégne , Nora Zidane , Christine Harmant , François Renaud et al.
American Journal of Human Genetics, 2019, 104 (3), pp.553-561. ⟨10.1016/j.ajhg.2019.02.007⟩
Journal articles hal-02352993v1
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Le dixième gène du VIH

Elodie Cassan , Anne-Muriel Arigon Chifolleau , Jean-Michel Mesnard , Antoine Gros , Olivier Gascuel et al.
médecine/sciences, 2017, 33 (5), pp.484-485. ⟨10.1051/medsci/20173305008⟩
Journal articles lirmm-01800291v1
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Experimental Adaptation of the Yellow Fever Virus to the Mosquito Aedes albopictus and Potential risk of urban epidemics in Brazil, South America

Fadila Amraoui , Adrien Pain , Géraldine Piorkowski , Marie Vazeille , Dinair Couto-Lima et al.
Scientific Reports, 2018, 8 (1), pp.14337. ⟨10.1038/s41598-018-32198-4⟩
Journal articles pasteur-01887190v1

Evolutionary insights into the high worldwide prevalence of MBL2 deficiency alleles

Paul Verdu , Luis Barreiro , Etienne Patin , Antoine Gessain , Olivier Cassar et al.
Human Molecular Genetics, 2006, 15 (17), pp.2650-2658. ⟨10.1093/hmg/ddl193⟩
Journal articles hal-02271444v1
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Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015–16: a modelling study

Moritz Kraemer , Nuno Faria , Robert Reiner , Nick Golding , Birgit Nikolay et al.
The Lancet Infectious Diseases, 2017, 17 (3), pp.330-338. ⟨10.1016/S1473-3099(16)30513-8⟩
Journal articles pasteur-03513010v1
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A Dual Protein-mRNA Localization Screen Reveals Compartmentalized Translation and Widespread Co-translational RNA Targeting

Racha Chouaib , Adham Safieddine , Xavier Pichon , Arthur Imbert , Oh Sung Kwon et al.
Developmental Cell, 2020, 54 (6), pp.773 - 791.e5. ⟨10.1016/j.devcel.2020.07.010⟩
Journal articles pasteur-02925687v1
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The somatic piRNA pathway controls germline transposition over generations

Bridlin Barckmann , Marianne El-Barouk , Alain Pélisson , Bruno Mugat , Blaise Maxime Li et al.
Nucleic Acids Research, 2018, 46 (18), pp.9524 - 9536. ⟨10.1093/nar/gky761⟩
Journal articles hal-01904679v1
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Promyelocytic Leukemia Protein (PML) Controls Listeria monocytogenes Infection.

David Ribet , Valérie Lallemand-Breitenbach , Omar Ferhi , Marie-Anne Nahori , Hugo Varet et al.
mBio, 2017, 8 (1), pp.1-16. ⟨10.1128/mBio.02179-16⟩
Journal articles pasteur-01433079v1
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The Human Dynamic Clamp: A Probe for Coordination Across Neural, Behavioral, and Social Scales

Guillaume Dumas , Aline Lefebvre , Mengsen Zhang , Emmanuelle Tognoli , J.A. Scott a Scott Kelso et al.
Complexity and Synergetics, Springer International Publishing, pp.317-332, 2018, 978-3-319-64333-5. ⟨10.1007/978-3-319-64334-2⟩
Book sections pasteur-02070421v1
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Implementing EEG hyperscanning setups

Paulo Barraza , Guillaume Dumas , Huanhuan Liu , Gabriel Blanco-Gomez , Marion van den Heuvel et al.
MethodsX, 2019, 6, pp.428-436. ⟨10.1016/j.mex.2019.02.021⟩
Journal articles pasteur-02066572v1
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Mapping influenza activity in emergency departments in France using Bayesian model-based geostatistics

Juliette Paireau , Camille Pelat , Céline Caserio-Schönemann , Isabelle Pontais , Yann Le Strat et al.
Influenza and Other Respiratory Viruses, 2018, 12 (6), pp.772-779. ⟨10.1111/irv.12599⟩
Journal articles pasteur-03430097v1