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Draft genome and description of Mixta mediterraneensis strain Marseille-Q2057T sp.nov., a new bacterium isolated from human healthy skin

M. Boxberger , A. Antezack , S. Magnien , N. Cassir , B. La Scola et al.
New Microbes and New Infections, 2021, 40, pp.100840. ⟨10.1016/j.nmni.2021.100840⟩
Journal articles hal-03428384v1

Whipple's disease and Tropheryma whipplei infections: from bench to bedside

Asma Boumaza , Eya Ben Azzouz , Jeffrey Arrindell , Hubert Lepidi , Soraya Mezouar et al.
The Lancet Infectious Diseases, 2022, 22 (10), pp.e280-e291. ⟨10.1016/S1473-3099(22)00128-1⟩
Journal articles hal-03985906v1
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Isolation of Viable SARS-CoV-2 Virus from Feces of an Immunocompromised Patient Suggesting a Possible Fecal Mode of Transmission

Julie Dergham , Jeremy Delerce , Marielle Bedotto , Bernard La Scola , Valérie Moal et al.
Journal of Clinical Medicine, 2021, 10 (12), pp.2696. ⟨10.3390/jcm10122696⟩
Journal articles hal-03333886v1
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Spatiotemporal characterisation and risk factor analysis of malaria outbreak in Cabo Verde in 2017

Adilson José Depina , Alex Jailson Barbosa Andrade , Abdoulaye Kane Dia , António Lima Moreira , Ullardina Domingos Furtado et al.
Tropical Medicine and Health, 2019, 47 (1), ⟨10.1186/s41182-018-0127-4⟩
Journal articles hal-02613647v1
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Multidrug-resistant Pseudomonas aeruginosa and mortality inmechanically ventilated ICU patients

Jean-Baptiste Denis , Samuel Lehingue , Vanessa Pauly , Nadim Cassir , Marc Gainnier et al.
American Journal of Infection Control, 2019, ⟨10.1016/j.ajic.2019.02.030⟩
Journal articles hal-02159275v1

Rapid Detection of Imipenem Resistance in Gram-Negative Bacteria Using Tabletop Scanning Electron Microscopy: A Preliminary Evaluation

Gabriel Haddad , Anthony Fontanini , Sara Bellali , Tatsuki Takakura , Yusuke Ominami et al.
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.658322⟩
Journal articles hal-03333966v1

Detection of EGFR Variants in Plasma

Cleo Keppens , John Palma , Partha Das , Sidney Scudder , Wei Wen et al.
Journal of Molecular Diagnostics, 2018, 20 (4), pp.483-494. ⟨10.1016/j.jmoldx.2018.03.006⟩
Journal articles hal-02471077v1

The functional convergence of antibiotic resistance in β‐lactamases is not conferred by a simple convergent substitution of amino acid

Vivek Keshri , Kevin Arbuckle , Olivier Chabrol , Jean‐marc Rolain , Didier Raoult et al.
Evolutionary Applications, 2019, ⟨10.1111/eva.12835⟩
Journal articles hal-02263608v1

Value of mathematical models for epidemics: the plague paradigm

Michel Drancourt , Didier Raoult
Clinical Microbiology and Infection, 2019, 25 (1), pp.120. ⟨10.1016/j.cmi.2018.08.014⟩
Journal articles hal-02384983v1
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Hybrid Capture-Based Next Generation Sequencing and Its Application to Human Infectious Diseases

Maxime Gaudin , Christelle Desnues
Frontiers in Microbiology, 2018, 9, pp.2924. ⟨10.3389/fmicb.2018.02924⟩
Journal articles hal-01948087v1
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Les dosages d’IgG anti-aliments : méthodes et pertinence clinique des résultats. Position du groupe de travail de biologie de la Société française d’allergologie

H. Chabane , V Doyen , F. Bienvenu , Karine Adel-Patient , J. Vitte et al.
Revue francaise d'allergologie, 2018, 58 (4), pp.334-357. ⟨10.1016/j.reval.2018.01.007⟩
Journal articles hal-01858895v1
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Intracranial haemorrhage in infective endocarditis

Erwan Salaün , Anissa Touil , Sandrine Hubert , Jean-Paul Casalta , Frederique Gouriet et al.
Archives of cardiovascular diseases, 2018, 111 (12), pp.712-721. ⟨10.1016/j.acvd.2018.03.009⟩
Journal articles hal-02006737v1
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Methods for detecting Gemmata spp. bacteremia in the microbiology laboratory

Jacques-Robert Christen , Edwin Edmond , Michel Drancourt
BMC Research Notes, 2018, 11 (1), pp.11. ⟨10.1186/s13104-017-3119-2⟩
Journal articles inserm-02075833v1

Efficacy and safety of antimicrobial de-escalation as a clinical strategy

Calypso Mathieu , Bruno Pastene , Nadim Cassir , Ignacio Martin-Loeches , Marc Leone et al.
Expert Review of Anti-infective Therapy, 2018, 17 (2), pp.79-88. ⟨10.1080/14787210.2019.1561275⟩
Journal articles hal-02438925v1
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Decrypting the environmental sources of Mycobacterium canettii by high-throughput biochemical profiling

Ahmed Loukil , Feriel Bouzid , Djaltou Aboubaker Osman , Michel Drancourt
PLoS ONE, 2019, 14 (9), pp.e0222078. ⟨10.1371/journal.pone.0222078⟩
Journal articles hal-02279611v1

Mycobacterium avium complex infection in patients with human immunodeficiency virus: A systematic review and meta‐analysis

Mohsen Heidary , Mohammad Javad Nasiri , Mehdi Mirsaeidi , Faramarz Masjedian Jazi , Saeed Khoshnood et al.
Journal of Cellular Physiology, 2018, 234 (7), pp.9994-10001. ⟨10.1002/jcp.27859⟩
Journal articles hal-02262511v1

Emergence of Vancomycin-Resistant Enterococcus faecium ST 80 in Pakistan

Linda Hadjadj , Muhammad Ali Syed , Jamil Bushra , Shahid Ahmad Abbasi , Jean-Marc Rolain et al.
Surgical Infections, 2019, ⟨10.1089/sur.2019.005⟩
Journal articles hal-02262713v1

Prevalence and characterization of Staphylococcus aureus in wastewater treatment plants by whole genomic sequencing

Atena Amirsoleimani , Gail Brion , Seydina Diene , Patrice François , Erin Richard et al.
Water Research, 2019, 158, pp.193-202. ⟨10.1016/j.watres.2019.04.035⟩
Journal articles hal-02262839v1

Re: chronic Q-fever-related complications and mortality: data from a nationwide cohort

C. Melenotte , M. Million , Didier Raoult
Clinical Microbiology and Infection, 2019, ⟨10.1016/j.cmi.2019.02.021⟩
Journal articles hal-02202629v1

Trapping the Enemy: Vermamoeba vermiformis Circumvents Faustovirus Mariensis Dissemination by Enclosing Viral Progeny inside Cysts

Iara Borges , Rodrigo Araújo Lima Rodrigues , Fábio Pio Dornas , Gabriel Almeida , Isabella Aquino et al.
Journal of Virology, 2019, 93 (14), ⟨10.1128/JVI.00312-19⟩
Journal articles hal-02262520v1

A case of sepsis in a 17th century man from Porto Ercole – Author's reply

Didier Raoult
The Lancet Infectious Diseases, 2019, 19 (1), pp.25-26. ⟨10.1016/S1473-3099(18)30726-6⟩
Journal articles hal-02262529v1
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Capacitive-resistive radiofrequency therapy to treat postpartum perineal pain: A randomized study

Florence Bretelle , Chantal Fabre , Marine Golka , Vanessa Pauly , Brimbelle Roth et al.
PLoS ONE, 2020, 15 (4), pp.e0231869. ⟨10.1371/journal.pone.0231869⟩
Journal articles hal-02564284v1
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Ancestrality and Mosaicism of Giant Viruses Supporting the Definition of the Fourth TRUC of Microbes

Philippe Colson , Anthony Levasseur , Bernard La Scola , Vikas Sharma , Arshan Nasir et al.
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.02668⟩
Journal articles hal-01948086v1

Passive Filtration, Rapid Scanning Electron Microscopy, and Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry for Treponema Culture and Identification from the Oral Cavity

Souad Belkacemi , Jacques Bou Khalil , Yusuke Ominami , Akiko Hisada , Anthony Fontanini et al.
Journal of Clinical Microbiology, 2019, 57 (10), ⟨10.1128/JCM.00517-19⟩
Journal articles hal-02457977v1

Ventilator-associated pneumonia diagnosis: a prioritization exercise based on multi-criteria decision analysis

João Ferreira-Coimbra , Carmen Ardanuy , Emili Diaz , Marc Leone , Gennaro de Pascale et al.
European Journal of Clinical Microbiology and Infectious Diseases, 2019, ⟨10.1007/s10096-019-03720-x⟩
Journal articles hal-02463236v1

Bead-captured Mycobacterium tuberculosis for next-generation sequencing diagnosis of uncultured tuberculosis

Jamal Saad , Ahmed Loukil , Michel Drancourt
European Journal of Clinical Microbiology and Infectious Diseases, 2020, 39 (1), pp.205-207. ⟨10.1007/s10096-019-03700-1⟩
Journal articles hal-02464623v1

Blood Culture–Negative Cardiovascular Infection in a Patient With Multiple Sclerosis

Clea Melenotte , Ahmed Loukil , Audrey Rico , Hubert Lepidi , Didier Raoult et al.
Open Forum Infectious Diseases, 2019, 6 (10), ⟨10.1093/ofid/ofz429⟩
Journal articles hal-02466925v1

Disseminated Mycobacterium ulcerans Infection in Wild Grasscutters (Thryonomys swinderianus), Côte d’Ivoire

Nassim Hammoudi , Agui Sylvestre Dizoe , Sofiane Regoui , Bernard Davoust , Michel Drancourt et al.
American Journal of Tropical Medicine and Hygiene, 2019, 101 (3), pp.491-493. ⟨10.4269/ajtmh.19-0137⟩
Journal articles hal-02466345v1

Hepatitis B Virus Genomics Knocking at the Door of Routine Diagnostic Laboratories

Philippe Colson , Patrick Borentain , Isabelle Ravaux , Sarah Aherfi
Journal of Infectious Diseases, 2019, ⟨10.1093/infdis/jiz544⟩
Journal articles hal-02467034v1

Variations in temperatures and the incidence of Buruli ulcer in Africa

Michel Drancourt , Dezemon Zingue
Travel Medicine and Infectious Disease, 2019, pp.101472. ⟨10.1016/j.tmaid.2019.101472⟩
Journal articles hal-02471067v1