Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes - CNRS - Centre national de la recherche scientifique Accéder directement au contenu
Article Dans Une Revue Bioinformatics Année : 2012

Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes

Résumé

Comparing transcriptomic data with proteomic data to identify protein-coding sequences is a long-standing challenge in molecular biology, one that is exacerbated by the increasing size of high-throughput datasets. To address this challenge, and thereby to improve the quality of genome annotation and understanding of genome biology, we have developed an integrated suite of programs, called Pinstripe. We demonstrate its application, utility and discovery power using transcriptomic and proteomic data from publicly available datasets.

Dates et versions

hal-03376931 , version 1 (13-10-2021)

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Citer

Dennis Gascoigne, Seth Cheetham, Pierre Cattenoz, Michael Clark, Paulo Amaral, et al.. Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes. Bioinformatics, 2012, 28 (23), pp.3042-3050. ⟨10.1093/bioinformatics/bts582⟩. ⟨hal-03376931⟩

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