A Protein-Engineered, Enhanced Yeast Display Platform for Rapid Evolution of Challenging Targets - CNRS - Centre national de la recherche scientifique
Article Dans Une Revue ACS Synthetic Biology Année : 2021

A Protein-Engineered, Enhanced Yeast Display Platform for Rapid Evolution of Challenging Targets

Résumé

Here, we enhanced the popular yeast display method by multiple rounds of DNA and protein engineering. We introduced surface exposure-tailored reporters, eUnaG2 and DnbALFA, creating a new platform of C and N terminal fusion vectors. The optimization of eUnaG2 resulted in five times brighter fluorescence and 10°C increased thermostability than UnaG. The optimized DnbALFA has 10-fold the level of expression of the starting protein. Following this, different plasmids were developed to create a complex platform allowing a broad range of protein expression organizations and labeling strategies. Our platform showed up to five times better separation between nonexpressing and expressing cells compared with traditional pCTcon2 and c-myc labeling, allowing for fewer rounds of selection and achieving higher binding affinities. Testing 16 different proteins, the enhanced system showed consistently stronger expression signals over c-myc labeling. In addition to gains in simplicity, speed, and cost-effectiveness, new applications were introduced to monitor protein surface exposure and protein retention in the secretion pathway that enabled successful protein engineering of hard-to-express proteins. As an example, we show how we optimized the WD40 domain of the ATG16L1 protein for yeast surface and soluble bacterial expression, starting from a nonexpressing protein. As a second example, we show how using the here-presented enhanced yeast display method we rapidly selected high-affinity binders toward two protein targets, demonstrating the simplicity of generating new protein−protein interactions. While the methodological changes are incremental, it results in a qualitative enhancement in the applicability of yeast display for many applications.
Fichier principal
Vignette du fichier
21Zahradnik_ACSSynBio.pdf (6.36 Mo) Télécharger le fichier
Origine Publication financée par une institution

Dates et versions

pasteur-03522398 , version 1 (12-01-2022)

Licence

Identifiants

Citer

Jiří Zahradník, Debabrata Dey, Shir Marciano, Lucie Kolářová, Chloé I Charendoff, et al.. A Protein-Engineered, Enhanced Yeast Display Platform for Rapid Evolution of Challenging Targets. ACS Synthetic Biology, 2021, 10 (12), pp.3445-3460. ⟨10.1021/acssynbio.1c00395⟩. ⟨pasteur-03522398⟩
28 Consultations
165 Téléchargements

Altmetric

Partager

More